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Aliases for GC22P031076 Gene

Subcategory (RNA class) for GC22P031076 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC22P031076 Gene

No Aliases found

ORGUL Members for GC22P031076 Gene

No data available for External Ids for GC22P031076 Gene

Summaries for GC22P031076 Gene

GeneCards Summary for GC22P031076 Gene

GC22P031076 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC22P031076 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC22P031076

Additional gene information for GC22P031076 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC22P031076 Gene

Genomics for GC22P031076 Gene

GeneHancer (GH) Regulatory Elements for GC22P031076 Gene

Promoters and enhancers for GC22P031076 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J031075 Enhancer 0.9 Ensembl ENCODE dbSUPER 600.7 +0.2 198 1.9 MAFK ZNF316 ZNF664 EMSY GC22P031076 SELENOM MORC2 TUG1 INPP5J ENSG00000273387 SMTN
GH22J031074 Enhancer 0.2 Ensembl 600.7 -1.2 -1233 0.2 GC22P031076 MORC2 TUG1 INPP5J SELENOM SMTN
GH22J031077 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 +7.0 6963 10.3 ZNF652 SP1 ZFX ELF3 CTCF ZNF148 NKRF POLR2A CEBPG ZNF687 SMTN ENSG00000273387 TUG1 MORC2 SF3A1 SELENOM PES1 INPP5J TBC1D10A PRR14L
GH22J031072 Enhancer 0.3 Ensembl 0.7 -2.3 -2333 1.6 NR2F2 SELENOM MORC2 TUG1 INPP5J ENSG00000273387 GC22P031076 SMTN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC22P031076 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC22P031076 Gene

Genomic Locations for GC22P031076 Gene
chr22:31,075,934-31,076,053
(GRCh38/hg38)
Size:
120 bases
Orientation:
Plus strand

Genomic View for GC22P031076 Gene

Genes around GC22P031076 on UCSC Golden Path with GeneCards custom track

GC22P031076 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC22P031076 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC22P031076 Gene

ORGUL Member Location for GC22P031076 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC22P031076 Gene

Proteins for GC22P031076 Gene

Post-translational modifications for GC22P031076 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC22P031076 Gene

Domains & Families for GC22P031076 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC22P031076 Gene

Function for GC22P031076 Gene

Phenotypes From GWAS Catalog for GC22P031076 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC22P031076 Gene

Localization for GC22P031076 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC22P031076 Gene

Pathways & Interactions for GC22P031076 Gene

PathCards logo

SuperPathways for GC22P031076 Gene

No Data Available

Interacting Proteins for GC22P031076 Gene

Gene Ontology (GO) - Biological Process for GC22P031076 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC22P031076 Gene

Drugs & Compounds for GC22P031076 Gene

No Compound Related Data Available

Transcripts for GC22P031076 Gene

fRNAdb Secondary structures for GC22P031076 Gene

  • FR036777
  • FR345851

Alternative Splicing Database (ASD) splice patterns (SP) for GC22P031076 Gene

No ASD Table

Relevant External Links for GC22P031076 Gene

GeneLoc Exon Structure for
GC22P031076

No data available for mRNA/cDNA for GC22P031076 Gene

Expression for GC22P031076 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC22P031076 Gene

Orthologs for GC22P031076 Gene

No data available for Orthologs and Evolution for GC22P031076 Gene

Paralogs for GC22P031076 Gene

No data available for Paralogs for GC22P031076 Gene

Variants for GC22P031076 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC22P031076 Gene

Disorders for GC22P031076 Gene

No disorders were found for GC22P031076 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC22P031076 Gene

Publications for GC22P031076 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC22P031076 Gene

Products for GC22P031076 Gene

Sources for GC22P031076 Gene

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