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Aliases for GC21P042292 Gene

Subcategory (RNA class) for GC21P042292 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC21P042292 Gene

No Aliases found

ORGUL Members for GC21P042292 Gene

No data available for External Ids for GC21P042292 Gene

Summaries for GC21P042292 Gene

GeneCards Summary for GC21P042292 Gene

GC21P042292 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC21P042292 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC21P042292 Gene

Genomics for GC21P042292 Gene

GeneHancer (GH) Regulatory Elements for GC21P042292 Gene

Promoters and enhancers for GC21P042292 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J042294 Enhancer 0.8 Ensembl 600.7 +0.7 668 0.4 CDC5L ZBTB7A TARDBP ZNF776 ZNF239 ZBTB20 ZNF23 TSC22D4 ZNF157 ZKSCAN1 GC21P042292 PRDM15 WDR4 U2AF1 ENSG00000233754 ZBTB21 ENSG00000227698 PKNOX1 GC21P042298 ABCG1
GH21J042293 Enhancer 0.7 dbSUPER 600.7 +1.8 1807 1.6 ZNF384 CDC5L ZBTB7A CTBP1 ZNF239 ZNF148 ZNF311 ZBTB20 ZNF662 ZIK1 GC21P042292 PRDM15 WDR4 ENSG00000227698 U2AF1 PKNOX1 ENSG00000233754 ZBTB21 GC21P042298 ABCG1
GH21J042287 Enhancer 0.9 Ensembl dbSUPER 0.7 -2.8 -2832 3.8 PRDM1 MLLT1 IKZF1 ZBTB33 ATF7 CTBP1 RBAK ZNF512B USF1 HDGF PRDM15 WDR4 GC21P042292 GC21M042234 ABCG1
GH21J042286 Enhancer 0.9 Ensembl dbSUPER 0.4 -6.4 -6433 1.4 RELA MLLT1 IKZF1 BACH1 IKZF2 TRIM22 PKNOX1 ZSCAN29 DPF2 EED GC21P042292 GC21M042234 ABCG1
GH21J042255 Promoter/Enhancer 1.3 EPDnew Ensembl dbSUPER 0.3 -37.9 -37933 3.6 ZNF547 ATF7 MNT CREB1 ZBTB33 CTCF ATF2 PAX8 KDM1A ABCG1 TFF2 NDUFV3 GC21M042234 GC21P042292
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC21P042292 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC21P042292 Gene

Genomic Locations for GC21P042292 Gene
chr21:42,292,533-42,293,943
(GRCh38/hg38)
Size:
1,411 bases
Orientation:
Plus strand

Genomic View for GC21P042292 Gene

Genes around GC21P042292 on UCSC Golden Path with GeneCards custom track

GC21P042292 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC21P042292 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC21P042292 Gene

Proteins for GC21P042292 Gene

Post-translational modifications for GC21P042292 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC21P042292 Gene

Domains & Families for GC21P042292 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC21P042292 Gene

Function for GC21P042292 Gene

Phenotypes From GWAS Catalog for GC21P042292 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC21P042292 Gene

Localization for GC21P042292 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC21P042292 Gene

Pathways & Interactions for GC21P042292 Gene

PathCards logo

SuperPathways for GC21P042292 Gene

No Data Available

Interacting Proteins for GC21P042292 Gene

Gene Ontology (GO) - Biological Process for GC21P042292 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC21P042292 Gene

Drugs & Compounds for GC21P042292 Gene

No Compound Related Data Available

Transcripts for GC21P042292 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC21P042292 Gene

No ASD Table

Relevant External Links for GC21P042292 Gene

GeneLoc Exon Structure for
GC21P042292

No data available for mRNA/cDNA for GC21P042292 Gene

Expression for GC21P042292 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC21P042292 Gene

Orthologs for GC21P042292 Gene

No data available for Orthologs and Evolution for GC21P042292 Gene

Paralogs for GC21P042292 Gene

No data available for Paralogs for GC21P042292 Gene

Variants for GC21P042292 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC21P042292 Gene

Disorders for GC21P042292 Gene

No disorders were found for GC21P042292 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC21P042292 Gene

Publications for GC21P042292 Gene

No publications were found for GC21P042292 Gene.

No data available for External Links for GC21P042292 Gene

Products for GC21P042292 Gene

Sources for GC21P042292 Gene

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