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Aliases for GC21P025574 Gene

Subcategory (RNA class) for GC21P025574 Gene

miRNA

Quality Score for this RNA gene is

10.2

Aliases for GC21P025574 Gene

No Aliases found

ORGUL Members for GC21P025574 Gene

No data available for External Ids for GC21P025574 Gene

Summaries for GC21P025574 Gene

GeneCards Summary for GC21P025574 Gene

GC21P025574 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC21P025574 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

Additional gene information for GC21P025574 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC21P025574 Gene

Genomics for GC21P025574 Gene

GeneHancer (GH) Regulatory Elements for GC21P025574 Gene

Promoters and enhancers for GC21P025574 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I025570 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 -0.8 -750 4.8 HDGF HDAC1 PKNOX1 ATF1 RB1 BATF IRF4 EGR1 ATF7 ETV6 GC21P025574 MIR155 MRPL39 LOC105372754 MIR155HG
GH21I025561 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.4 -11.3 -11297 3 SMAD1 RB1 BATF RAD21 KLF5 IRF4 ZNF207 ZNF143 ATF7 ETV6 MIR155HG MRPL39 GC21P025574
GH21I025571 Enhancer 0.7 ENCODE dbSUPER 0.8 -3.8 -3795 0.2 POLR2A SMAD5 NFATC1 CHD1 CHD7 BCLAF1 MRPL39 GC21P025574 MIR155HG
GH21I025567 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -6.0 -5971 1.7 HDGF CTCF SMAD5 CBFB ZBED1 CHD1 RAD21 NR2F2 POLR2A NFATC1 MRPL39 GC21P025574 MIR155HG
GH21I025565 Enhancer 0.8 ENCODE dbSUPER 0.4 -8.3 -8316 0.7 PKNOX1 SMAD5 CBFB ZBED1 CHD1 ATF2 POLR2A NFATC1 ZBTB33 MLLT1 MIR155HG GC21P025574
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC21P025574 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC21P025574 Gene

Genomic Locations for GC21P025574 Gene
chr21:25,573,979-25,574,044
(GRCh38/hg38)
Size:
66 bases
Orientation:
Plus strand

Genomic View for GC21P025574 Gene

Genes around GC21P025574 on UCSC Golden Path with GeneCards custom track

GC21P025574 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC21P025574 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC21P025574 Gene

Proteins for GC21P025574 Gene

Post-translational modifications for GC21P025574 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC21P025574 Gene

Domains & Families for GC21P025574 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC21P025574 Gene

Function for GC21P025574 Gene

Animal Model Products

miRNA for GC21P025574 Gene

miRTarBase miRNAs that target GC21P025574

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC21P025574 Gene

Localization for GC21P025574 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC21P025574 Gene

Pathways & Interactions for GC21P025574 Gene

SuperPathways for GC21P025574 Gene

No Data Available

Interacting Proteins for GC21P025574 Gene

Gene Ontology (GO) - Biological Process for GC21P025574 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC21P025574 Gene

Drugs & Compounds for GC21P025574 Gene

No Compound Related Data Available

Transcripts for GC21P025574 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC21P025574 Gene

No ASD Table

Relevant External Links for GC21P025574 Gene

GeneLoc Exon Structure for
GC21P025574

No data available for mRNA/cDNA for GC21P025574 Gene

Expression for GC21P025574 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC21P025574 Gene

Orthologs for GC21P025574 Gene

No data available for Orthologs and Evolution for GC21P025574 Gene

Paralogs for GC21P025574 Gene

No data available for Paralogs for GC21P025574 Gene

Variants for GC21P025574 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC21P025574 Gene

Disorders for GC21P025574 Gene

No disorders were found for GC21P025574 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC21P025574 Gene

Publications for GC21P025574 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. New human and mouse microRNA genes found by homology search. (PMID: 15634332) Weber MJ (The FEBS journal 2005) 1
  4. Accumulation of miR-155 and BIC RNA in human B cell lymphomas. (PMID: 15738415) Eis PS … Dahlberg JE (Proceedings of the National Academy of Sciences of the United States of America 2005) 1
  5. Altered expression profiles of microRNAs during TPA-induced differentiation of HL-60 cells. (PMID: 15325244) Kasashima K … Kozu T (Biochemical and biophysical research communications 2004) 1

Products for GC21P025574 Gene

Sources for GC21P025574 Gene

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