Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC21M032360 Gene

Subcategory (RNA class) for GC21M032360 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for GC21M032360 Gene

No Aliases found

ORGUL Members for GC21M032360 Gene

No data available for External Ids for GC21M032360 Gene

Summaries for GC21M032360 Gene

GeneCards Summary for GC21M032360 Gene

GC21M032360 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC21M032360 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC21M032360 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC21M032360 Gene

Genomics for GC21M032360 Gene

GeneHancer (GH) Regulatory Elements for GC21M032360 Gene

Promoters and enhancers for GC21M032360 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I032360 Enhancer 0.6 ENCODE dbSUPER 550.8 +1.5 1538 0.2 FOXA2 ZNF366 GC21M032360 URB1 URB1-AS1 GC21M032342
GH21I032363 Enhancer 0.9 ENCODE dbSUPER 0.8 -2.2 -2170 1.5 ELF3 SOX13 TFAP4 FOXA2 SAP130 ARID4B RARA TEAD3 NR2F6 CREM URB1-AS1 URB1 LOC105372779 ENSG00000252045 GC21M032360 GC21M032378 SNORA80A
GH21I032370 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -9.6 -9561 3 ZBTB21 JUN ZKSCAN1 ZNF335 SCRT2 FOS ZNF639 ZNF362 ZNF189 ZNF10 URB1-AS1 EVA1C PAXBP1 URB1 LOC105372779 ENSG00000238390 TCP10L SCAF4 GC21M032360 GC21M032378
GH21I032347 Enhancer 0.8 ENCODE dbSUPER 0.4 +13.8 13781 2.5 SMARCE1 CLOCK DPF2 MNT CEBPG ZIC2 SREBF1 CTBP1 FOS URB1-AS1 URB1 SNORA80A LOC105372779 TCP10L GC21M032342 GC21M032360
GH21I032351 Enhancer 0.6 ENCODE dbSUPER 0.4 +10.7 10748 0.2 SMARCE1 CTCF MNT URB1-AS1 SNORA80A LOC105372779 URB1 TCP10L GC21M032342 GC21M032360
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC21M032360 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC21M032360 Gene

Genomic Locations for GC21M032360 Gene
chr21:32,360,191-32,362,385
(GRCh38/hg38)
Size:
2,195 bases
Orientation:
Minus strand

Genomic View for GC21M032360 Gene

Genes around GC21M032360 on UCSC Golden Path with GeneCards custom track

GC21M032360 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC21M032360 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC21M032360 Gene

ORGUL Member Location for GC21M032360 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC21M032360 Gene

Proteins for GC21M032360 Gene

Post-translational modifications for GC21M032360 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC21M032360 Gene

Domains & Families for GC21M032360 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC21M032360 Gene

Function for GC21M032360 Gene

Animal Model Products

miRNA for GC21M032360 Gene

miRTarBase miRNAs that target GC21M032360

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC21M032360 Gene

Localization for GC21M032360 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC21M032360 Gene

Pathways & Interactions for GC21M032360 Gene

SuperPathways for GC21M032360 Gene

No Data Available

Interacting Proteins for GC21M032360 Gene

Gene Ontology (GO) - Biological Process for GC21M032360 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC21M032360 Gene

Drugs & Compounds for GC21M032360 Gene

No Compound Related Data Available

Transcripts for GC21M032360 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC21M032360 Gene

No ASD Table

Relevant External Links for GC21M032360 Gene

GeneLoc Exon Structure for
GC21M032360

No data available for mRNA/cDNA for GC21M032360 Gene

Expression for GC21M032360 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC21M032360 Gene

Orthologs for GC21M032360 Gene

No data available for Orthologs and Evolution for GC21M032360 Gene

Paralogs for GC21M032360 Gene

No data available for Paralogs for GC21M032360 Gene

Variants for GC21M032360 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC21M032360 Gene

Disorders for GC21M032360 Gene

No disorders were found for GC21M032360 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC21M032360 Gene

Publications for GC21M032360 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. (PMID: 15790807) Cheng J … Gingeras TR (Science (New York, N.Y.) 2005) 1

Products for GC21M032360 Gene

Sources for GC21M032360 Gene

Content
Loading form....