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Aliases for GC21M029140 Gene

Subcategory (RNA class) for GC21M029140 Gene

Y RNA

Quality Score for this RNA gene is

12

Aliases for GC21M029140 Gene

No Aliases found

ORGUL Members for GC21M029140 Gene

No data available for External Ids for GC21M029140 Gene

Summaries for GC21M029140 Gene

GeneCards Summary for GC21M029140 Gene

GC21M029140 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC21M029140 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC21M029140 Gene

Genomics for GC21M029140 Gene

GeneHancer (GH) Regulatory Elements for GC21M029140 Gene

Promoters and enhancers for GC21M029140 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21I029155 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -16.4 -16366 1.4 HDAC1 ATF1 ZNF335 ZNF366 EGR1 ZSCAN5C ATF7 CREM ZNF174 SP3 BACH1 ENSG00000231125 USP16 RPL23P2 LTN1 RPL12P9 CCT8 MAP3K7CL ENSG00000201984 GC21M029140
GH21I029161 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -24.0 -23988 3.4 RAD21 ZBTB40 RFX5 ZNF335 EGR1 ZNF366 FOS EGR2 ZNF654 ZNF362 BACH1 ENSG00000224649 MAP3K7CL CCT8 BACH1-IT2 BACH1-AS1 LINC00189 USP16 LOC105372767 ENSG00000201984
GH21I029129 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +8.7 8679 2.7 TEAD4 TAL1 FOSL1 TCF12 ZNF316 NCOR1 POLR2A SCRT2 CBFA2T2 ATF7 RWDD2B GRIK1-AS1 RPL12P9 ENSG00000201984 GC21M029140 MAP3K7CL
GH21I029144 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -6.3 -6259 3 MEIS2 JUN CEBPB CEBPG EP300 OSR2 FOSL1 JUND POLR2A STAT3 MAP3K7CL CCT8 BACH1 LTN1 ENSG00000201984 GC21M029140 LOC105372767
GH21I029174 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -36.5 -36508 2.6 FOXA2 NFIB ZNF529 RAD21 RARA YY1 ZNF335 ZNF366 ZSCAN5C RXRA RPL23P2 LINC00189 CCT8 BACH1 MAP3K7CL LOC105372767 GC21M029140 ENSG00000201984
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC21M029140 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC21M029140 Gene

Genomic Locations for GC21M029140 Gene
chr21:29,139,284-29,139,384
(GRCh38/hg38)
Size:
101 bases
Orientation:
Minus strand

Genomic View for GC21M029140 Gene

Genes around GC21M029140 on UCSC Golden Path with GeneCards custom track

GC21M029140 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC21M029140 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC21M029140 Gene

Proteins for GC21M029140 Gene

Post-translational modifications for GC21M029140 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC21M029140 Gene

Domains & Families for GC21M029140 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC21M029140 Gene

Function for GC21M029140 Gene

Animal Model Products

miRNA for GC21M029140 Gene

miRTarBase miRNAs that target GC21M029140

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC21M029140 Gene

Localization for GC21M029140 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC21M029140 Gene

Pathways & Interactions for GC21M029140 Gene

SuperPathways for GC21M029140 Gene

No Data Available

Interacting Proteins for GC21M029140 Gene

Gene Ontology (GO) - Biological Process for GC21M029140 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC21M029140 Gene

Drugs & Compounds for GC21M029140 Gene

No Compound Related Data Available

Transcripts for GC21M029140 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC21M029140 Gene

No ASD Table

Relevant External Links for GC21M029140 Gene

GeneLoc Exon Structure for
GC21M029140

No data available for mRNA/cDNA for GC21M029140 Gene

Expression for GC21M029140 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC21M029140 Gene

Orthologs for GC21M029140 Gene

No data available for Orthologs and Evolution for GC21M029140 Gene

Paralogs for GC21M029140 Gene

No data available for Paralogs for GC21M029140 Gene

Variants for GC21M029140 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC21M029140 Gene

Disorders for GC21M029140 Gene

No disorders were found for GC21M029140 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC21M029140 Gene

Publications for GC21M029140 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC21M029140 Gene

Sources for GC21M029140 Gene

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