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Aliases for GC21M027144 Gene

Subcategory (RNA class) for GC21M027144 Gene


Quality Score for this RNA gene is


Aliases for GC21M027144 Gene

No Aliases found

ORGUL Members for GC21M027144 Gene

No data available for External Ids for GC21M027144 Gene

Summaries for GC21M027144 Gene

GeneCards Summary for GC21M027144 Gene

GC21M027144 is an RNA Gene, and is affiliated with the SECIS RNA class.

fRNAdb sequence ontologies for GC21M027144 Gene

  • SECIS_element: The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.

Additional gene information for GC21M027144 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC21M027144 Gene

Genomics for GC21M027144 Gene

GeneHancer (GH) Regulatory Elements for GC21M027144 Gene

Promoters and enhancers for GC21M027144 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J027143 Enhancer 0.2 Ensembl 650.7 -0.3 -311 0.4 GC21M027144 GC21M027145 GPX1P2 ADAMTS5
GH21J027132 Enhancer 0.3 ENCODE 0.4 +10.8 10803 0.2 CEBPB GC21M027144 ADAMTS5
GH21J027101 Enhancer 0.4 ENCODE 0.3 +41.6 41563 0.1 STAT3 CEBPB EP300 GC21M027144 ADAMTS5
GH21J027047 Enhancer 0.6 ENCODE 0.2 +95.5 95490 1 PKNOX1 MAFF SMARCA4 SMARCC2 CEBPB EP300 TCF7L2 EZH2 TRIM28 ADAMTS5 GC21M027144
GH21J027024 Enhancer 0.5 ENCODE 0.1 +118.5 118512 1.4 GATA3 CEBPB EP300 ATF2 ADAMTS5 GC21M027144
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC21M027144 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC21M027144 Gene

Genomic Locations for GC21M027144 Gene
63 bases
Minus strand

Genomic View for GC21M027144 Gene

Genes around GC21M027144 on UCSC Golden Path with GeneCards custom track

GC21M027144 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC21M027144 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC21M027144 Gene

Proteins for GC21M027144 Gene

Post-translational modifications for GC21M027144 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC21M027144 Gene

Domains & Families for GC21M027144 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC21M027144 Gene

Function for GC21M027144 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC21M027144 Gene

Localization for GC21M027144 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC21M027144 Gene

Pathways & Interactions for GC21M027144 Gene

SuperPathways for GC21M027144 Gene

No Data Available

Interacting Proteins for GC21M027144 Gene

Gene Ontology (GO) - Biological Process for GC21M027144 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC21M027144 Gene

Drugs & Compounds for GC21M027144 Gene

No Compound Related Data Available

Transcripts for GC21M027144 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC21M027144 Gene

No ASD Table

Relevant External Links for GC21M027144 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC21M027144 Gene

Expression for GC21M027144 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC21M027144 Gene

Orthologs for GC21M027144 Gene

No data available for Orthologs and Evolution for GC21M027144 Gene

Paralogs for GC21M027144 Gene

No data available for Paralogs for GC21M027144 Gene

Variants for GC21M027144 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC21M027144 Gene

Disorders for GC21M027144 Gene

No disorders were found for GC21M027144 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC21M027144 Gene

Publications for GC21M027144 Gene

  1. A survey of metazoan selenocysteine insertion sequences. (PMID: 12458087) Lambert A … Gautheret D (Biochimie 2002) 1
  2. A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs. (PMID: 8634917) Walczak R … Krol A (RNA (New York, N.Y.) 1996) 1

Products for GC21M027144 Gene

Sources for GC21M027144 Gene

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