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Aliases for GC21M017529 Gene

Subcategory (RNA class) for GC21M017529 Gene

Y RNA

Quality Score for this RNA gene is

15

Aliases for GC21M017529 Gene

No Aliases found

ORGUL Members for GC21M017529 Gene

No data available for External Ids for GC21M017529 Gene

Summaries for GC21M017529 Gene

GeneCards Summary for GC21M017529 Gene

GC21M017529 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC21M017529 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC21M017529 Gene

Genomics for GC21M017529 Gene

GeneHancer (GH) Regulatory Elements for GC21M017529 Gene

Promoters and enhancers for GC21M017529 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J017526 Enhancer 1.1 Ensembl ENCODE 650.7 -0.5 -511 2.1 ELF3 FOXA2 MLX ZSCAN9 RAD21 RARA RFX5 FOS CREM HMG20B ENSG00000200754 GC21M017529 LINC01549 CXADR GC21P017568
GH21J017527 Enhancer 0.2 ENCODE 650.7 +1.0 1011 0.3 ENSG00000200754 GC21M017529 BTF3L4P1 CXADR
GH21J017521 Enhancer 1 ENCODE 0.7 +4.3 4278 2.9 FOXA2 ARNT MLX ARID4B FEZF1 DMAP1 ZNF48 ETS1 YY1 TCF12 LINC01549 BTF3L4P1 ENSG00000200754 GC21M017529 CXADR
GH21J017537 Enhancer 0.8 ENCODE 0.4 -10.2 -10170 0.8 FOXA2 FEZF1 ZSCAN5C RCOR1 FOS CEBPB GATAD2B SP1 ZNF217 MAFF GC21M017529 ENSG00000200754 CXADR GC21P017568
GH21J017549 Enhancer 0.8 ENCODE 0.3 -22.8 -22771 0.2 ELF3 FOXA2 ARID4B RAD21 ZNF48 ZSCAN9 RARA ETS1 FOS CREM LINC01549 GC21P017568 ENSG00000200754 GC21M017529 CXADR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC21M017529 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC21M017529 Gene

Genomic Locations for GC21M017529 Gene
chr21:17,527,141-17,527,247
(GRCh38/hg38)
Size:
107 bases
Orientation:
Minus strand

Genomic View for GC21M017529 Gene

Genes around GC21M017529 on UCSC Golden Path with GeneCards custom track

GC21M017529 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC21M017529 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC21M017529 Gene

Proteins for GC21M017529 Gene

Post-translational modifications for GC21M017529 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC21M017529 Gene

Domains & Families for GC21M017529 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC21M017529 Gene

Function for GC21M017529 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC21M017529 Gene

Localization for GC21M017529 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC21M017529 Gene

Pathways & Interactions for GC21M017529 Gene

SuperPathways for GC21M017529 Gene

No Data Available

Interacting Proteins for GC21M017529 Gene

Gene Ontology (GO) - Biological Process for GC21M017529 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC21M017529 Gene

Drugs & Compounds for GC21M017529 Gene

No Compound Related Data Available

Transcripts for GC21M017529 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC21M017529 Gene

No ASD Table

Relevant External Links for GC21M017529 Gene

GeneLoc Exon Structure for
GC21M017529

No data available for mRNA/cDNA for GC21M017529 Gene

Expression for GC21M017529 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC21M017529 Gene

Orthologs for GC21M017529 Gene

No data available for Orthologs and Evolution for GC21M017529 Gene

Paralogs for GC21M017529 Gene

No data available for Paralogs for GC21M017529 Gene

Variants for GC21M017529 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC21M017529 Gene

Disorders for GC21M017529 Gene

No disorders were found for GC21M017529 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC21M017529 Gene

Publications for GC21M017529 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC21M017529 Gene

Sources for GC21M017529 Gene

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