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Aliases for GC20P064162 Gene

Subcategory (RNA class) for GC20P064162 Gene

lncRNA

Quality Score for this RNA gene is

11

Aliases for GC20P064162 Gene

No Aliases found

ORGUL Members for GC20P064162 Gene

No data available for External Ids for GC20P064162 Gene

Summaries for GC20P064162 Gene

GeneCards Summary for GC20P064162 Gene

GC20P064162 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC20P064162 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

Additional gene information for GC20P064162 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC20P064162 Gene

Genomics for GC20P064162 Gene

GeneHancer (GH) Regulatory Elements for GC20P064162 Gene

Promoters and enhancers for GC20P064162 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I064161 Enhancer 1.1 ENCODE dbSUPER 550.8 -0.3 -270 0.2 MLX ZFP64 ARID4B SIN3A ZNF48 SLC30A9 ZNF143 SP5 NFYC NCOA1 GC20P064162 GC20P064163 MYT1
GH20I064166 Enhancer 0.8 ENCODE dbSUPER 550.8 +1.9 1930 0.2 SREBF1 MXI1 NONO FOXK2 BHLHE40 CHD1 CUX1 PRDM10 GC20P064163 GC20P064162 MIR647 UCKL1 ENSG00000237371 GMEB2 CICP4 MYT1 GC20M064230
GH20I064160 Enhancer 0.6 ENCODE dbSUPER 550.8 -1.6 -1618 1.2 POLR2A WT1 GC20P064162 GC20P064163 LKAAEAR1 OPRL1 RGS19 MYT1
GH20I064162 Enhancer 0.5 ENCODE dbSUPER 550.8 -0.9 -930 0.2 POLR2A GC20P064163 GC20P064162 LKAAEAR1 OPRL1 RGS19 MYT1
GH20I064164 Promoter/Enhancer 1.1 EPDnew dbSUPER 0.8 +2.1 2100 0.1 SREBF1 MXI1 NONO POLR2A FOXK2 BHLHE40 CUX1 PRDM10 MYT1 MIR647 UCKL1 ENSG00000237371 GMEB2 CICP4 GC20P064163 GC20P064162 GC20M064230
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC20P064162 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC20P064162 Gene

Genomic Locations for GC20P064162 Gene
chr20:64,162,333-64,162,642
(GRCh38/hg38)
Size:
310 bases
Orientation:
Plus strand

Genomic View for GC20P064162 Gene

Genes around GC20P064162 on UCSC Golden Path with GeneCards custom track

GC20P064162 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20P064162 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC20P064162 Gene

Proteins for GC20P064162 Gene

Post-translational modifications for GC20P064162 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20P064162 Gene

Domains & Families for GC20P064162 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20P064162 Gene

Function for GC20P064162 Gene

Animal Model Products

miRNA for GC20P064162 Gene

miRTarBase miRNAs that target GC20P064162

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC20P064162 Gene

Localization for GC20P064162 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC20P064162 Gene

Pathways & Interactions for GC20P064162 Gene

SuperPathways for GC20P064162 Gene

No Data Available

Interacting Proteins for GC20P064162 Gene

Gene Ontology (GO) - Biological Process for GC20P064162 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20P064162 Gene

Drugs & Compounds for GC20P064162 Gene

No Compound Related Data Available

Transcripts for GC20P064162 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC20P064162 Gene

No ASD Table

Relevant External Links for GC20P064162 Gene

GeneLoc Exon Structure for
GC20P064162

No data available for mRNA/cDNA for GC20P064162 Gene

Expression for GC20P064162 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20P064162 Gene

Orthologs for GC20P064162 Gene

No data available for Orthologs and Evolution for GC20P064162 Gene

Paralogs for GC20P064162 Gene

No data available for Paralogs for GC20P064162 Gene

Variants for GC20P064162 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC20P064162 Gene

Disorders for GC20P064162 Gene

No disorders were found for GC20P064162 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20P064162 Gene

Publications for GC20P064162 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC20P064162 Gene

Sources for GC20P064162 Gene

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