Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC20P038354 Gene

Subcategory (RNA class) for GC20P038354 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC20P038354 Gene

No Aliases found

ORGUL Members for GC20P038354 Gene

No data available for External Ids for GC20P038354 Gene

Summaries for GC20P038354 Gene

GeneCards Summary for GC20P038354 Gene

GC20P038354 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC20P038354 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC20P038354 Gene

Genomics for GC20P038354 Gene

GeneHancer (GH) Regulatory Elements for GC20P038354 Gene

Promoters and enhancers for GC20P038354 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J038356 Enhancer 0.9 ENCODE 600.7 +1.7 1660 0.2 CC2D1A CTCF MLLT1 GTF2F1 ZSCAN21 CDC5L MCM2 TRIM24 RAD21 EGR1 GC20P038354 RALGAPB SNHG17 RN7SKP173 DHX35 ACTR5 SNORA71C SNORA71A CTNNBL1 ENSG00000206249
GH20J038353 Enhancer 0.3 Ensembl 600.7 -0.9 -941 1.8 SCRT2 GC20P038354 ENSG00000206249 ENSG00000224635 SNORA71A SNORA71B LBP BPI GC20P038348
GH20J038357 Enhancer 0.8 FANTOM5 0.7 +2.9 2922 0.2 BACH1 SMARCA4 DPF2 ATF1 HDAC1 CTBP1 MTA3 EGR1 ZBTB11 HDAC2 ENSG00000206249 ENSG00000224635 SNORA71A SNORA71B BPI GC20P038354 LBP ENSG00000275285
GH20J038350 Enhancer 0.6 Ensembl ENCODE 0.7 -3.7 -3741 0.6 IKZF1 HNF4A BPI GC20P038348 GC20P038354 LBP
GH20J038373 Enhancer 0.9 Ensembl ENCODE 0.4 +18.6 18602 0.5 SP1 RXRA ZNF24 HDAC1 EP300 HDAC2 NR2F2 SKIL BCOR ZNF395 ENSG00000224635 SNORA71B SNORA71A ENSG00000206249 SNORA71C SNHG17 SNORA71D ENSG00000201811 SNHG11 SNORA60
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC20P038354 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC20P038354 Gene

Genomic Locations for GC20P038354 Gene
chr20:38,354,842-38,359,595
(GRCh38/hg38)
Size:
4,754 bases
Orientation:
Plus strand

Genomic View for GC20P038354 Gene

Genes around GC20P038354 on UCSC Golden Path with GeneCards custom track

GC20P038354 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20P038354 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC20P038354 Gene

Proteins for GC20P038354 Gene

Post-translational modifications for GC20P038354 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20P038354 Gene

Domains & Families for GC20P038354 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20P038354 Gene

Function for GC20P038354 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC20P038354 Gene

Localization for GC20P038354 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC20P038354 Gene

Pathways & Interactions for GC20P038354 Gene

PathCards logo

SuperPathways for GC20P038354 Gene

No Data Available

Interacting Proteins for GC20P038354 Gene

Gene Ontology (GO) - Biological Process for GC20P038354 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20P038354 Gene

Drugs & Compounds for GC20P038354 Gene

No Compound Related Data Available

Transcripts for GC20P038354 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC20P038354 Gene

No ASD Table

Relevant External Links for GC20P038354 Gene

GeneLoc Exon Structure for
GC20P038354

No data available for mRNA/cDNA for GC20P038354 Gene

Expression for GC20P038354 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20P038354 Gene

Orthologs for GC20P038354 Gene

No data available for Orthologs and Evolution for GC20P038354 Gene

Paralogs for GC20P038354 Gene

No data available for Paralogs for GC20P038354 Gene

Variants for GC20P038354 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC20P038354 Gene

Disorders for GC20P038354 Gene

No disorders were found for GC20P038354 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20P038354 Gene

Publications for GC20P038354 Gene

No publications were found for GC20P038354 Gene.

No data available for External Links for GC20P038354 Gene

Products for GC20P038354 Gene

Sources for GC20P038354 Gene

Content
Loading form....