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Aliases for GC20M042208 Gene

Subcategory (RNA class) for GC20M042208 Gene

lncRNA

Quality Score for this RNA gene is

15

Aliases for GC20M042208 Gene

No Aliases found

ORGUL Members for GC20M042208 Gene

No data available for External Ids for GC20M042208 Gene

Summaries for GC20M042208 Gene

GeneCards Summary for GC20M042208 Gene

GC20M042208 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC20M042208 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC20M042208 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC20M042208 Gene

Genomics for GC20M042208 Gene

GeneHancer (GH) Regulatory Elements for GC20M042208 Gene

Promoters and enhancers for GC20M042208 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J042193 Enhancer 0.5 ENCODE 0.4 +19.1 19113 0.2 NFIB ZFX SIN3A ELF1 RFX5 FOS MNT GC20M042208 LOC101927182 PTPRT
GH20J042096 Enhancer 0.7 ENCODE dbSUPER 0.1 +113.3 113337 4.4 CREB1 RCOR1 ATF2 FOS LOC101927182 GC20M042208
GH20J042160 Enhancer 0.3 Ensembl 0.2 +51.9 51908 1 MAFK GC20M042208 LOC101927182
GH20J042272 Enhancer 0.3 Ensembl 0.2 -60.4 -60392 0.4 NRF1 GC20M042208 GC20P042338 PTPRT
GH20J042118 Enhancer 0.3 Ensembl 0.2 +93.7 93687 0.6 ATF2 LOC101927182 GC20M042208
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC20M042208 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC20M042208 Gene

Genomic Locations for GC20M042208 Gene
chr20:42,208,156-42,212,409
(GRCh38/hg38)
Size:
4,254 bases
Orientation:
Minus strand

Genomic View for GC20M042208 Gene

Genes around GC20M042208 on UCSC Golden Path with GeneCards custom track

GC20M042208 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20M042208 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC20M042208 Gene

Proteins for GC20M042208 Gene

Post-translational modifications for GC20M042208 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20M042208 Gene

Domains & Families for GC20M042208 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20M042208 Gene

Function for GC20M042208 Gene

Phenotypes From GWAS Catalog for GC20M042208 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC20M042208 Gene

Localization for GC20M042208 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC20M042208 Gene

Pathways & Interactions for GC20M042208 Gene

PathCards logo

SuperPathways for GC20M042208 Gene

No Data Available

Interacting Proteins for GC20M042208 Gene

Gene Ontology (GO) - Biological Process for GC20M042208 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20M042208 Gene

Drugs & Compounds for GC20M042208 Gene

No Compound Related Data Available

Transcripts for GC20M042208 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC20M042208 Gene

No ASD Table

Relevant External Links for GC20M042208 Gene

GeneLoc Exon Structure for
GC20M042208

No data available for mRNA/cDNA for GC20M042208 Gene

Expression for GC20M042208 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20M042208 Gene

Orthologs for GC20M042208 Gene

No data available for Orthologs and Evolution for GC20M042208 Gene

Paralogs for GC20M042208 Gene

No data available for Paralogs for GC20M042208 Gene

Variants for GC20M042208 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC20M042208 Gene

Disorders for GC20M042208 Gene

No disorders were found for GC20M042208 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20M042208 Gene

Publications for GC20M042208 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC20M042208 Gene

Products for GC20M042208 Gene

Sources for GC20M042208 Gene

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