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Aliases for GC20M037976 Gene

Subcategory (RNA class) for GC20M037976 Gene

7SK RNA

Quality Score for this RNA gene is

15

Aliases for GC20M037976 Gene

No Aliases found

ORGUL Members for GC20M037976 Gene

No data available for External Ids for GC20M037976 Gene

Summaries for GC20M037976 Gene

GeneCards Summary for GC20M037976 Gene

GC20M037976 is an RNA Gene, and is affiliated with the 7SK RNA class.

fRNAdb sequence ontologies for GC20M037976 Gene

  • snRNA: A small nuclear RNA molecule involved in pre-mRNA splicing and processing.

Additional gene information for GC20M037976 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC20M037976 Gene

Genomics for GC20M037976 Gene

GeneHancer (GH) Regulatory Elements for GC20M037976 Gene

Promoters and enhancers for GC20M037976 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J037976 Enhancer 0.7 Ensembl ENCODE dbSUPER 600.7 -1.9 -1919 1.6 ZNF652 GC20M037976 RN7SKP185 VSTM2L RPRD1B TGM2 GC20M037959
GH20J037983 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.2 -13235 10.2 SP1 ELF3 CTCF CBFA2T2 ZNF148 CEBPG RERE ZNF384 NFIB HNF1A TGM2 VSTM2L RPRD1B TTI1 RALGAPB NNAT GC20M037976 RN7SKP185 GC20M037959
GH20J037903 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.2 +71.3 71251 3.9 CC2D1A CTCF ZNF121 ZNF384 ZSCAN21 ZNF644 EGR1 RAD21 PKNOX1 ARID2 VSTM2L RALGAPB SNHG17 RN7SKP173 TTI1 ACTR5 SNORA71C RPN2 RPS3P2 RBL1
GH20J037972 Enhancer 0.4 Ensembl 0.7 +3.1 3080 0.8 ZBTB11 NANOG POU5F1 VSTM2L GC20M037976 RN7SKP185 GC20M037959
GH20J038000 Enhancer 0.9 Ensembl ENCODE 0.3 -25.9 -25872 2.6 NFIB EGR1 CTBP1 NFE2 FOS ZKSCAN1 FOSL1 NFIC RCOR1 NRF1 TTI1 VSTM2L RPRD1B GC20M037959 RN7SKP185 GC20M037976
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC20M037976 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC20M037976 Gene

Genomic Locations for GC20M037976 Gene
chr20:37,975,154-37,975,481
(GRCh38/hg38)
Size:
328 bases
Orientation:
Minus strand

Genomic View for GC20M037976 Gene

Genes around GC20M037976 on UCSC Golden Path with GeneCards custom track

GC20M037976 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20M037976 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC20M037976 Gene

Proteins for GC20M037976 Gene

Post-translational modifications for GC20M037976 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20M037976 Gene

Domains & Families for GC20M037976 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20M037976 Gene

Function for GC20M037976 Gene

Phenotypes From GWAS Catalog for GC20M037976 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC20M037976 Gene

Localization for GC20M037976 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC20M037976 Gene

Pathways & Interactions for GC20M037976 Gene

PathCards logo

SuperPathways for GC20M037976 Gene

No Data Available

Interacting Proteins for GC20M037976 Gene

Gene Ontology (GO) - Biological Process for GC20M037976 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20M037976 Gene

Drugs & Compounds for GC20M037976 Gene

No Compound Related Data Available

Transcripts for GC20M037976 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC20M037976 Gene

No ASD Table

Relevant External Links for GC20M037976 Gene

GeneLoc Exon Structure for
GC20M037976

No data available for mRNA/cDNA for GC20M037976 Gene

Expression for GC20M037976 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20M037976 Gene

Orthologs for GC20M037976 Gene

No data available for Orthologs and Evolution for GC20M037976 Gene

Paralogs for GC20M037976 Gene

No data available for Paralogs for GC20M037976 Gene

Variants for GC20M037976 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC20M037976 Gene

Disorders for GC20M037976 Gene

No disorders were found for GC20M037976 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20M037976 Gene

Publications for GC20M037976 Gene

  1. Transcription: surprising role for an elusive small nuclear RNA. (PMID: 11864590) Blencowe BJ (Current biology : CB 2002) 1
  2. Structural analyses of the 7SK ribonucleoprotein (RNP), the most abundant human small RNP of unknown function. (PMID: 1646389) Wassarman DA … Steitz JA (Molecular and cellular biology 1991) 1

No data available for External Links for GC20M037976 Gene

Products for GC20M037976 Gene

Sources for GC20M037976 Gene

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