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Aliases for GC20M034549 Gene

Subcategory (RNA class) for GC20M034549 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC20M034549 Gene

No Aliases found

ORGUL Members for GC20M034549 Gene

No data available for External Ids for GC20M034549 Gene

Summaries for GC20M034549 Gene

GeneCards Summary for GC20M034549 Gene

GC20M034549 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC20M034549 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC20M034549 Gene

Genomics for GC20M034549 Gene

GeneHancer (GH) Regulatory Elements for GC20M034549 Gene

Promoters and enhancers for GC20M034549 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J034564 Enhancer 0.7 FANTOM5 dbSUPER 600.7 +1.3 1296 0.3 ZNF687 NR2F1 EBF1 GC20M034549 TP53INP2 ENSG00000231034 PIGU MAP1LC3A
GH20J034570 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.7 -4.9 -4943 0.7 ZNF148 TRIM24 SP7 SMARCA4 IKZF1 RFX1 ZIC2 ATF1 PKNOX1 LEF1 TP53INP2 GC20M034549 GC20P034589 PIGU
GH20J034557 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.4 +7.0 7003 3.1 SP1 ZNF687 CREM CREB1 RXRA ATF1 LARP7 POLR2A TRIM22 DPF2 MAP1LC3A PIGU NCOA6 EIF6 MMP24OS ITCH GC20M034549
GH20J034577 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.3 -13338 7.8 ELF3 CTCF ZNF687 AHR SP7 PPARG CREM PRDM1 MLLT1 IKZF1 MAP1LC3A NCOA6 PIGU TP53INP2 ERGIC3 GC20P034589 GC20M034549
GH20J034546 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 0.4 +19.2 19237 0.9 POLR2A MAP1LC3A TP53INP2 ENSG00000231034 PIGU GC20M034549
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC20M034549 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC20M034549 Gene

Genomic Locations for GC20M034549 Gene
chr20:34,549,054-34,566,363
(GRCh38/hg38)
Size:
17,310 bases
Orientation:
Minus strand

Genomic View for GC20M034549 Gene

Genes around GC20M034549 on UCSC Golden Path with GeneCards custom track

GC20M034549 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC20M034549 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC20M034549 Gene

Proteins for GC20M034549 Gene

Post-translational modifications for GC20M034549 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC20M034549 Gene

Domains & Families for GC20M034549 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC20M034549 Gene

Function for GC20M034549 Gene

Phenotypes From GWAS Catalog for GC20M034549 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC20M034549 Gene

Localization for GC20M034549 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC20M034549 Gene

Pathways & Interactions for GC20M034549 Gene

PathCards logo

SuperPathways for GC20M034549 Gene

No Data Available

Interacting Proteins for GC20M034549 Gene

Gene Ontology (GO) - Biological Process for GC20M034549 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC20M034549 Gene

Drugs & Compounds for GC20M034549 Gene

No Compound Related Data Available

Transcripts for GC20M034549 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC20M034549 Gene

No ASD Table

Relevant External Links for GC20M034549 Gene

GeneLoc Exon Structure for
GC20M034549

No data available for mRNA/cDNA for GC20M034549 Gene

Expression for GC20M034549 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC20M034549 Gene

Orthologs for GC20M034549 Gene

No data available for Orthologs and Evolution for GC20M034549 Gene

Paralogs for GC20M034549 Gene

No data available for Paralogs for GC20M034549 Gene

Variants for GC20M034549 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC20M034549 Gene

Disorders for GC20M034549 Gene

No disorders were found for GC20M034549 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC20M034549 Gene

Publications for GC20M034549 Gene

No publications were found for GC20M034549 Gene.

No data available for External Links for GC20M034549 Gene

Products for GC20M034549 Gene

Sources for GC20M034549 Gene

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