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Aliases for GC19P038399 Gene

Subcategory (RNA class) for GC19P038399 Gene

lncRNA

Quality Score for this RNA gene is

13.2

Aliases for GC19P038399 Gene

No Aliases found

ORGUL Members for GC19P038399 Gene

No data available for External Ids for GC19P038399 Gene

Summaries for GC19P038399 Gene

GeneCards Summary for GC19P038399 Gene

GC19P038399 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC19P038399 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC19P038399

Additional gene information for GC19P038399 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC19P038399 Gene

Genomics for GC19P038399 Gene

GeneHancer (GH) Regulatory Elements for GC19P038399 Gene

Promoters and enhancers for GC19P038399 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J038386 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -9.4 -9421 4 HDGF ATF1 SIN3A ZNF2 TCF12 ZNF121 GLIS2 ZNF213 ZNF143 KLF7 GGN SPRED3 ZFP30 ZNF607 ZNF793 CATSPERG C19orf33 ZNF570 ZNF573 HNRNPL
GH19J038394 Enhancer 0.8 Ensembl ENCODE 0.7 -2.9 -2890 1.9 PKNOX1 MXI1 USF1 USF2 KLF14 SP1 XRCC5 POLR2A KLF9 ZBTB33 CATSPERG C19orf33 GC19P038399 GGN SPRED3
GH19J038401 Enhancer 0.6 ENCODE 0.7 +3.2 3165 0.2 OSR2 GATA3 FOXA2 RFX1 ZNF114 IKZF1 NEUROD1 BMI1 FOXA1 FAM98C CATSPERG GC19P038399
GH19J038392 Enhancer 0.8 ENCODE 0.4 -5.3 -5327 1.1 HDAC1 HDGF PKNOX1 DNMT3B ZNF121 GATA2 EGR1 EGR2 ZBTB2 ZNF623 C19orf33 GGN SPRED3 GC19P038399
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC19P038399 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC19P038399 Gene

Genomic Locations for GC19P038399 Gene
chr19:38,398,181-38,399,881
(GRCh38/hg38)
Size:
1,701 bases
Orientation:
Plus strand

Genomic View for GC19P038399 Gene

Genes around GC19P038399 on UCSC Golden Path with GeneCards custom track

GC19P038399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC19P038399 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC19P038399 Gene

ORGUL Member Location for GC19P038399 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC19P038399 Gene

Proteins for GC19P038399 Gene

Post-translational modifications for GC19P038399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC19P038399 Gene

Domains & Families for GC19P038399 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC19P038399 Gene

Function for GC19P038399 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC19P038399 Gene

Localization for GC19P038399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC19P038399 Gene

Pathways & Interactions for GC19P038399 Gene

SuperPathways for GC19P038399 Gene

No Data Available

Interacting Proteins for GC19P038399 Gene

Gene Ontology (GO) - Biological Process for GC19P038399 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC19P038399 Gene

Drugs & Compounds for GC19P038399 Gene

No Compound Related Data Available

Transcripts for GC19P038399 Gene

fRNAdb Secondary structures for GC19P038399 Gene

  • FR119602

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC19P038399 Gene

No ASD Table

Relevant External Links for GC19P038399 Gene

GeneLoc Exon Structure for
GC19P038399

No data available for mRNA/cDNA for GC19P038399 Gene

Expression for GC19P038399 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC19P038399 Gene

Orthologs for GC19P038399 Gene

No data available for Orthologs and Evolution for GC19P038399 Gene

Paralogs for GC19P038399 Gene

No data available for Paralogs for GC19P038399 Gene

Variants for GC19P038399 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC19P038399 Gene

Disorders for GC19P038399 Gene

No disorders were found for GC19P038399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC19P038399 Gene

Publications for GC19P038399 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC19P038399 Gene

Sources for GC19P038399 Gene

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