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Aliases for GC19P030712 Gene

Subcategory (RNA class) for GC19P030712 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC19P030712 Gene

No Aliases found

ORGUL Members for GC19P030712 Gene

No data available for External Ids for GC19P030712 Gene

Summaries for GC19P030712 Gene

GeneCards Summary for GC19P030712 Gene

GC19P030712 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC19P030712 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC19P030712

Additional gene information for GC19P030712 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC19P030712 Gene

Genomics for GC19P030712 Gene

GeneHancer (GH) Regulatory Elements for GC19P030712 Gene

Promoters and enhancers for GC19P030712 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J030710 Enhancer 1.1 UCNEbase Ensembl ENCODE 600.7 +0.2 241 4.6 POLR2A EZH2 CBX8 ZNF362 GC19P030712 LOC105372354 ZNF536
GH19J030718 Enhancer 0.9 FANTOM5 ENCODE 0.4 +7.1 7076 1.6 GLIS2 ZBTB8A PRDM10 ZIC2 ZNF341 ZBTB20 OSR2 ZBTB26 ZBTB48 YY1 LOC105372354 ZNF536 GC19P030712
GH19J030686 Enhancer 1.2 UCNEbase Ensembl ENCODE 0.3 -24.6 -24559 4.2 MAFK PRDM1 ZNF680 POLR2A CTCF ZBTB20 ZNF654 TCF7L2 ENSG00000267760 GC19P030712 ZNF536
GH19J030669 Promoter/Enhancer 1.2 Ensembl ENCODE 0.3 -42.7 -42659 0.8 CTCF KLF14 GLIS2 ZBTB8A ZNF600 PATZ1 ZBTB48 ZBTB17 RAD21 SMC3 ENSG00000267760 GC19P030712 ZNF536
GH19J030690 Enhancer 0.9 UCNEbase ENCODE 0.3 -20.3 -20253 2.5 ZNF600 RCOR1 CEBPB HLF ZBTB33 GC19P030712 ENSG00000267760 ZNF536
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC19P030712 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC19P030712 Gene

Genomic Locations for GC19P030712 Gene
chr19:30,712,460-30,712,616
(GRCh38/hg38)
Size:
157 bases
Orientation:
Plus strand

Genomic View for GC19P030712 Gene

Genes around GC19P030712 on UCSC Golden Path with GeneCards custom track

GC19P030712 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC19P030712 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC19P030712 Gene

ORGUL Member Location for GC19P030712 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC19P030712 Gene

Proteins for GC19P030712 Gene

Post-translational modifications for GC19P030712 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC19P030712 Gene

Domains & Families for GC19P030712 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC19P030712 Gene

Function for GC19P030712 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC19P030712 Gene

Localization for GC19P030712 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC19P030712 Gene

Pathways & Interactions for GC19P030712 Gene

PathCards logo

SuperPathways for GC19P030712 Gene

No Data Available

Interacting Proteins for GC19P030712 Gene

Gene Ontology (GO) - Biological Process for GC19P030712 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC19P030712 Gene

Drugs & Compounds for GC19P030712 Gene

No Compound Related Data Available

Transcripts for GC19P030712 Gene

fRNAdb Secondary structures for GC19P030712 Gene

  • FR189425
  • FR039187
  • FR271005

Alternative Splicing Database (ASD) splice patterns (SP) for GC19P030712 Gene

No ASD Table

Relevant External Links for GC19P030712 Gene

GeneLoc Exon Structure for
GC19P030712

No data available for mRNA/cDNA for GC19P030712 Gene

Expression for GC19P030712 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC19P030712 Gene

Orthologs for GC19P030712 Gene

No data available for Orthologs and Evolution for GC19P030712 Gene

Paralogs for GC19P030712 Gene

No data available for Paralogs for GC19P030712 Gene

Variants for GC19P030712 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC19P030712 Gene

Disorders for GC19P030712 Gene

No disorders were found for GC19P030712 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC19P030712 Gene

Publications for GC19P030712 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC19P030712 Gene

Products for GC19P030712 Gene

Sources for GC19P030712 Gene

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