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Aliases for GC19P014515 Gene

Subcategory (RNA class) for GC19P014515 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC19P014515 Gene

No Aliases found

ORGUL Members for GC19P014515 Gene

No data available for External Ids for GC19P014515 Gene

Summaries for GC19P014515 Gene

GeneCards Summary for GC19P014515 Gene

GC19P014515 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC19P014515 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC19P014515

Additional gene information for GC19P014515 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC19P014515 Gene

Genomics for GC19P014515 Gene

GeneHancer (GH) Regulatory Elements for GC19P014515 Gene

Promoters and enhancers for GC19P014515 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J014512 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.5 3517 12 SP1 CC2D1A ELF3 ZFX MNT ZNF148 NKRF POLR2A MLLT1 ZNF121 TECR DNAJB1 AKAP8 BRD4 CCDC130 MRI1 ZNF333 NOTCH3 SYDE1 SNRPGP15
GH19J014494 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 -18.7 -18703 3.8 HDGF SP1 CC2D1A ZFX ELF3 MNT CBFA2T2 ZNF148 MLLT1 CEBPG GIPC1 AKAP8 BRD4 ZNF333 MRI1 CCDC130 DDX39A DCAF15 RFX1 DNAJB1
GH19J014509 Enhancer 1 ENCODE dbSUPER 0.7 -4.5 -4518 2.4 CEBPG ZNF384 MAFK SP7 PRDM1 EGR1 SMARCA4 DPF2 IKZF1 CEBPA DNAJB1 TECR GC19P014515 GIPC1
GH19J014502 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.4 -9.5 -9482 6.8 ZFX CC2D1A CTCF CBFA2T2 ZNF121 CEBPG NCOA3 MYC TFE3 SP1 DNAJB1 GIPC1 PKN1 ADGRE5 TECR SNRPGP15 IL27RA DDX39A GC19P014515
GH19J014498 Enhancer 0.2 Ensembl 0.4 -16.0 -16012 0.4 GIPC1 GC19P014515
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC19P014515 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC19P014515 Gene

Genomic Locations for GC19P014515 Gene
chr19:14,515,013-14,515,151
(GRCh38/hg38)
Size:
139 bases
Orientation:
Plus strand
chr19:14,515,182-14,516,417
(GRCh37/hg19)
Size:
1,236 bases
Orientation:
Plus strand

Genomic View for GC19P014515 Gene

Genes around GC19P014515 on UCSC Golden Path with GeneCards custom track

GC19P014515 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC19P014515 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC19P014515 Gene

ORGUL Member Location for GC19P014515 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC19P014515 Gene

Proteins for GC19P014515 Gene

Post-translational modifications for GC19P014515 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC19P014515 Gene

Domains & Families for GC19P014515 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC19P014515 Gene

Function for GC19P014515 Gene

Phenotypes From GWAS Catalog for GC19P014515 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC19P014515 Gene

Localization for GC19P014515 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC19P014515 Gene

Pathways & Interactions for GC19P014515 Gene

PathCards logo

SuperPathways for GC19P014515 Gene

No Data Available

Interacting Proteins for GC19P014515 Gene

Gene Ontology (GO) - Biological Process for GC19P014515 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC19P014515 Gene

Drugs & Compounds for GC19P014515 Gene

No Compound Related Data Available

Transcripts for GC19P014515 Gene

fRNAdb Secondary structures for GC19P014515 Gene

  • FR150190
  • FR216411

Alternative Splicing Database (ASD) splice patterns (SP) for GC19P014515 Gene

No ASD Table

Relevant External Links for GC19P014515 Gene

GeneLoc Exon Structure for
GC19P014515

No data available for mRNA/cDNA for GC19P014515 Gene

Expression for GC19P014515 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC19P014515 Gene

Orthologs for GC19P014515 Gene

No data available for Orthologs and Evolution for GC19P014515 Gene

Paralogs for GC19P014515 Gene

No data available for Paralogs for GC19P014515 Gene

Variants for GC19P014515 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC19P014515 Gene

Disorders for GC19P014515 Gene

No disorders were found for GC19P014515 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC19P014515 Gene

Publications for GC19P014515 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC19P014515 Gene

Products for GC19P014515 Gene

Sources for GC19P014515 Gene

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