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Aliases for GC19P013876 Gene

Subcategory (RNA class) for GC19P013876 Gene


Quality Score for this RNA gene is


Aliases for GC19P013876 Gene

No Aliases found

ORGUL Members for GC19P013876 Gene

No data available for External Ids for GC19P013876 Gene

Summaries for GC19P013876 Gene

GeneCards Summary for GC19P013876 Gene

GC19P013876 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC19P013876 Gene - the ORGUL cluster for this gene includes several descriptions:

  • miRNA: Small, ~22-nt, RNA molecule that is the endogenous transcript of a miRNA gene. Micro RNAs are produced from precursor molecules (SO:0000647) that can form local hairpin structures, which ordinarily are processed (via the Dicer pathway) such that a single miRNA molecule accumulates from one arm of a hairpin precursor molecule. Micro RNAs may trigger the cleavage of their target molecules or act as translational repressors.

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC19P013876

Additional gene information for GC19P013876 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC19P013876 Gene

Genomics for GC19P013876 Gene

GeneHancer (GH) Regulatory Elements for GC19P013876 Gene

Promoters and enhancers for GC19P013876 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J013872 Enhancer 0.7 ENCODE 600.7 -1.8 -1799 1 SP1 ZNF148 MTA1 GMEB1 ATF1 ZNF740 CTCF HDAC1 POLR2A NR2C1 GC19P013876 GC19P013877 GC19P013878 MIR181C MIR181D GC19P013879 CC2D1A NANOS3
GH19J013879 Promoter/Enhancer 1.6 Ensembl ENCODE 0.4 +6.6 6593 3.5 SP1 CC2D1A CTCF ELF3 ZNF148 GTF2F1 ZNF687 AHR MAFK TFE3 CC2D1A C19orf57 PALM3 EEF1DP1 MISP3 GC19P013876 NANOS3
GH19J013884 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE 0.4 +11.4 11354 3.1 ZNF121 NCOA3 MYC IKZF1 ZBTB33 ZIC2 RFX1 ZNF341 BMI1 KLF4 CC2D1A C19orf57 PALM3 EEF1DP1 MISP3 IL27RA CCDC130 DCAF15 GC19P013876
GH19J013899 Enhancer 0.9 Ensembl ENCODE 0.3 +25.4 25400 2.2 SP1 PPARG SP5 ZNF644 RXRA PRDM10 RXRB SOX13 SCRT2 TCF7 CC2D1A C19orf57 GC19P013876
GH19J013903 Enhancer 0.9 Ensembl ENCODE 0.3 +28.7 28715 1.2 CC2D1A CTCF ZSCAN21 KAT8 PRDM10 ZNF143 SCRT2 ZNF580 ZNF217 SMARCA5 CC2D1A C19orf57 GC19P013876
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC19P013876 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC19P013876 Gene

Genomic Locations for GC19P013876 Gene
104 bases
Plus strand

Genomic View for GC19P013876 Gene

Genes around GC19P013876 on UCSC Golden Path with GeneCards custom track

GC19P013876 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC19P013876 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC19P013876 Gene

ORGUL Member Location for GC19P013876 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC19P013876 Gene

Proteins for GC19P013876 Gene

Post-translational modifications for GC19P013876 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC19P013876 Gene

Domains & Families for GC19P013876 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC19P013876 Gene

Function for GC19P013876 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC19P013876 Gene

Localization for GC19P013876 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC19P013876 Gene

Pathways & Interactions for GC19P013876 Gene

PathCards logo

SuperPathways for GC19P013876 Gene

No Data Available

Interacting Proteins for GC19P013876 Gene

Gene Ontology (GO) - Biological Process for GC19P013876 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC19P013876 Gene

Drugs & Compounds for GC19P013876 Gene

No Compound Related Data Available

Transcripts for GC19P013876 Gene

fRNAdb Secondary structures for GC19P013876 Gene

  • FR290556
  • FR050105
  • FR015045

Alternative Splicing Database (ASD) splice patterns (SP) for GC19P013876 Gene

No ASD Table

Relevant External Links for GC19P013876 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC19P013876 Gene

Expression for GC19P013876 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC19P013876 Gene

Orthologs for GC19P013876 Gene

No data available for Orthologs and Evolution for GC19P013876 Gene

Paralogs for GC19P013876 Gene

No data available for Paralogs for GC19P013876 Gene

Variants for GC19P013876 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC19P013876 Gene

Disorders for GC19P013876 Gene

No disorders were found for GC19P013876 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC19P013876 Gene

Publications for GC19P013876 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for GC19P013876 Gene

Products for GC19P013876 Gene

Sources for GC19P013876 Gene

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