Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC19M047700 Gene

Subcategory (RNA class) for GC19M047700 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for GC19M047700 Gene

No Aliases found

ORGUL Members for GC19M047700 Gene

No data available for External Ids for GC19M047700 Gene

Summaries for GC19M047700 Gene

GeneCards Summary for GC19M047700 Gene

GC19M047700 is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for GC19M047700 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC19M047700 Gene

Genomics for GC19M047700 Gene

GeneHancer (GH) Regulatory Elements for GC19M047700 Gene

Promoters and enhancers for GC19M047700 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J047738 Enhancer 0.3 dbSUPER 600.7 +0.7 705 0.7 ZNF664 GC19M047700 NOP53 SELENOW PIR33748 EHD2
GH19J047741 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.7 -4.5 -4450 5.4 SP1 ZFX CTCF ELF3 MNT SIX5 ZNF148 NKRF POLR2A MLLT1 NOP53 ZC3H4 BICRA SELENOW GRWD1 RASIP1 CA11 ENSG00000268093 ZSWIM9 NOP53-AS1
GH19J047728 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.4 +10.0 9995 3.1 CC2D1A SP1 CBFA2T2 ZNF148 GTF2F1 ZSCAN21 ZNF24 ELF1 POLR2A SP7 ZC3H4 NOP53-AS1 CCDC9 CYTH2 GRWD1 SELENOW BICRA LIG1 NOP53 KPTN
GH19J047712 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.3 +25.5 25461 2.8 CTCF CC2D1A NCOA6 ZNF404 ZNF680 EGR1 ZNF560 GMEB1 POLR2A ARID2 EHD2 ZC3H4 BICRA NOP53-AS1 GRWD1 CYTH2 CCDC9 KDELR1 NOP53 ENSG00000268093
GH19J047716 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.3 +20.6 20573 4.4 MNT GTF2F1 CDC5L TFE3 SP7 POLR2A IKZF1 ZBTB8A ZNF544 ZNF600 ZC3H4 BICRA GRWD1 NOP53 NOP53-AS1 KDELR1 RPL18 CCDC9 ENSG00000268093 ENSG00000268746
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC19M047700 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC19M047700 Gene

Genomic Locations for GC19M047700 Gene
chr19:47,700,509-47,739,654
(GRCh38/hg38)
Size:
39,146 bases
Orientation:
Minus strand

Genomic View for GC19M047700 Gene

Genes around GC19M047700 on UCSC Golden Path with GeneCards custom track

GC19M047700 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC19M047700 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC19M047700 Gene

Proteins for GC19M047700 Gene

Post-translational modifications for GC19M047700 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC19M047700 Gene

Domains & Families for GC19M047700 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC19M047700 Gene

Function for GC19M047700 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC19M047700 Gene

Localization for GC19M047700 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC19M047700 Gene

Pathways & Interactions for GC19M047700 Gene

PathCards logo

SuperPathways for GC19M047700 Gene

No Data Available

Interacting Proteins for GC19M047700 Gene

Gene Ontology (GO) - Biological Process for GC19M047700 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC19M047700 Gene

Drugs & Compounds for GC19M047700 Gene

No Compound Related Data Available

Transcripts for GC19M047700 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC19M047700 Gene

No ASD Table

Relevant External Links for GC19M047700 Gene

GeneLoc Exon Structure for
GC19M047700

No data available for mRNA/cDNA for GC19M047700 Gene

Expression for GC19M047700 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC19M047700 Gene

Orthologs for GC19M047700 Gene

No data available for Orthologs and Evolution for GC19M047700 Gene

Paralogs for GC19M047700 Gene

No data available for Paralogs for GC19M047700 Gene

Variants for GC19M047700 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC19M047700 Gene

Disorders for GC19M047700 Gene

No disorders were found for GC19M047700 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC19M047700 Gene

Publications for GC19M047700 Gene

No publications were found for GC19M047700 Gene.

No data available for External Links for GC19M047700 Gene

Products for GC19M047700 Gene

Sources for GC19M047700 Gene

Content
Loading form....