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Aliases for GC19M032244 Gene

Subcategory (RNA class) for GC19M032244 Gene

rRNA

Quality Score for this RNA gene is

15

Aliases for GC19M032244 Gene

No Aliases found

ORGUL Members for GC19M032244 Gene

No data available for External Ids for GC19M032244 Gene

Summaries for GC19M032244 Gene

GeneCards Summary for GC19M032244 Gene

GC19M032244 is an RNA Gene, and is affiliated with the rRNA class.

fRNAdb sequence ontologies for GC19M032244 Gene

  • rRNA_5S: 5S ribosomal RNA (5S rRNA) is a component of the large ribosomal subunit in both prokaryotes and eukaryotes. In eukaryotes, it is synthesised by RNA polymerase III (the other eukaryotic rRNAs are cleaved from a 45S precursor synthesised by RNA polymerase I). In Xenopus oocytes, it has been shown that fingers 4-7 of the nine-zinc finger transcription factor TFIIIA can bind to the central region of 5S RNA. Thus, in addition to positively regulating 5S rRNA transcription, TFIIIA also stabilises 5S rRNA until it is required for transcription.

Additional gene information for GC19M032244 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC19M032244 Gene

Genomics for GC19M032244 Gene

GeneHancer (GH) Regulatory Elements for GC19M032244 Gene

Promoters and enhancers for GC19M032244 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J032242 Enhancer 0.5 UCNEbase 0.7 +2.1 2063 0.2 CBX8 DPY19L3 GC19M032244 GC19P032645
GH19J032241 Enhancer 0.4 UCNEbase 0.7 +3.0 2960 0.2 GC19M032244 GC19P032645
GH19J032243 Enhancer 0.3 FANTOM5 0.7 +2.2 2213 0.1 CBX8 GC19M032244 GC19P032645
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC19M032244 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC19M032244 Gene

Genomic Locations for GC19M032244 Gene
chr19:32,243,964-32,244,077
(GRCh38/hg38)
Size:
114 bases
Orientation:
Minus strand

Genomic View for GC19M032244 Gene

Genes around GC19M032244 on UCSC Golden Path with GeneCards custom track

GC19M032244 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC19M032244 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC19M032244 Gene

Proteins for GC19M032244 Gene

Post-translational modifications for GC19M032244 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC19M032244 Gene

Domains & Families for GC19M032244 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC19M032244 Gene

Function for GC19M032244 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC19M032244 Gene

Localization for GC19M032244 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC19M032244 Gene

Pathways & Interactions for GC19M032244 Gene

SuperPathways for GC19M032244 Gene

No Data Available

Interacting Proteins for GC19M032244 Gene

Gene Ontology (GO) - Biological Process for GC19M032244 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC19M032244 Gene

Drugs & Compounds for GC19M032244 Gene

No Compound Related Data Available

Transcripts for GC19M032244 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC19M032244 Gene

No ASD Table

Relevant External Links for GC19M032244 Gene

GeneLoc Exon Structure for
GC19M032244

No data available for mRNA/cDNA for GC19M032244 Gene

Expression for GC19M032244 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC19M032244 Gene

Orthologs for GC19M032244 Gene

No data available for Orthologs and Evolution for GC19M032244 Gene

Paralogs for GC19M032244 Gene

No data available for Paralogs for GC19M032244 Gene

Variants for GC19M032244 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC19M032244 Gene

Disorders for GC19M032244 Gene

No disorders were found for GC19M032244 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC19M032244 Gene

Publications for GC19M032244 Gene

  1. 5S Ribosomal RNA Database. (PMID: 11752286) Szymanski M … Barciszewski J (Nucleic acids research 2002) 1
  2. Crystal structure of the ribosome at 5.5 A resolution. (PMID: 11283358) Yusupov MM … Noller HF (Science (New York, N.Y.) 2001) 1
  3. The role of the central zinc fingers of transcription factor IIIA in binding to 5 S RNA. (PMID: 10926492) Searles MA … Klug A (Journal of molecular biology 2000) 1

Products for GC19M032244 Gene

Sources for GC19M032244 Gene

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