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Aliases for GC18P009947 Gene

Subcategory (RNA class) for GC18P009947 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC18P009947 Gene

No Aliases found

ORGUL Members for GC18P009947 Gene

No data available for External Ids for GC18P009947 Gene

Summaries for GC18P009947 Gene

GeneCards Summary for GC18P009947 Gene

GC18P009947 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC18P009947 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC18P009947 Gene

Genomics for GC18P009947 Gene

GeneHancer (GH) Regulatory Elements for GC18P009947 Gene

Promoters and enhancers for GC18P009947 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J009950 Enhancer 0.8 ENCODE 0.7 +3.7 3689 1.5 HDGF HDAC1 RAD21 CHAMP1 ZNF766 ZNF143 DEK SMARCA5 ZNF654 ZBTB2 GC18P009951 PIR32710 NAPG ENSG00000272799 GC18P009947 VAPA LOC105371983
GH18J009951 Enhancer 0.6 ENCODE 0.7 +2.8 2825 0.2 HDAC1 ATF1 DACH1 MAFG NFIC ZNF766 FOXK2 POLR2A RBM22 ZNF24 PIR32710 GC18P009951 NAPG GC18P009947 VAPA
GH18J009928 Enhancer 0.7 ENCODE dbSUPER 0.4 -18.4 -18424 1.6 HDGF ZNF664 PRDM6 GTF2E2 CEBPG CUX1 ZEB2 ENSG00000272799 RNA5SP450 GC18P009947 VAPA
GH18J009926 Enhancer 0.6 dbSUPER 0.3 -21.0 -21008 0.9 HDAC1 HDGF KLF11 SOX6 GTF2A2 ATF4 POLR2A HMBOX1 RBM22 MLLT1 ENSG00000272799 RNA5SP450 VAPA GC18P009947
GH18J009937 Enhancer 0.4 dbSUPER 0.4 -9.8 -9797 1.2 SMAD5 POLR2A VAPA TXNDC2 ENSG00000272799 GC18P009947 RNA5SP450
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC18P009947 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC18P009947 Gene

Genomic Locations for GC18P009947 Gene
chr18:9,947,594-9,951,353
(GRCh38/hg38)
Size:
3,760 bases
Orientation:
Plus strand
chr18:9,947,591-9,951,350
(GRCh37/hg19)
Size:
3,760 bases
Orientation:
Plus strand

Genomic View for GC18P009947 Gene

Genes around GC18P009947 on UCSC Golden Path with GeneCards custom track

GC18P009947 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC18P009947 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC18P009947 Gene

Proteins for GC18P009947 Gene

Post-translational modifications for GC18P009947 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC18P009947 Gene

Domains & Families for GC18P009947 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC18P009947 Gene

Function for GC18P009947 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC18P009947 Gene

Localization for GC18P009947 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC18P009947 Gene

Pathways & Interactions for GC18P009947 Gene

SuperPathways for GC18P009947 Gene

No Data Available

Interacting Proteins for GC18P009947 Gene

Gene Ontology (GO) - Biological Process for GC18P009947 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC18P009947 Gene

Drugs & Compounds for GC18P009947 Gene

No Compound Related Data Available

Transcripts for GC18P009947 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC18P009947 Gene

No ASD Table

Relevant External Links for GC18P009947 Gene

GeneLoc Exon Structure for
GC18P009947

No data available for mRNA/cDNA for GC18P009947 Gene

Expression for GC18P009947 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC18P009947 Gene

Orthologs for GC18P009947 Gene

No data available for Orthologs and Evolution for GC18P009947 Gene

Paralogs for GC18P009947 Gene

No data available for Paralogs for GC18P009947 Gene

Variants for GC18P009947 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC18P009947 Gene

Disorders for GC18P009947 Gene

No disorders were found for GC18P009947 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC18P009947 Gene

Publications for GC18P009947 Gene

No publications were found for GC18P009947 Gene.

Products for GC18P009947 Gene

Sources for GC18P009947 Gene

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