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Aliases for GC18P009504 Gene

Subcategory (RNA class) for GC18P009504 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC18P009504 Gene

No Aliases found

No data available for External Ids for GC18P009504 Gene

Summaries for GC18P009504 Gene

GeneCards Summary for GC18P009504 Gene

GC18P009504 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC18P009504 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for GC18P009504 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC18P009504 Gene

Genomics for GC18P009504 Gene

GeneHancer (GH) Regulatory Elements for GC18P009504 Gene

Promoters and enhancers for GC18P009504 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I009473 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 -27.2 -27168 4.5 HDGF PKNOX1 SMAD1 FOXA2 ARNT SIN3A DMAP1 YY1 SLC30A9 POLR2B RALBP1 ENSG00000273335 GC18P009473 GC18P009504
GH18I009493 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -7.4 -7417 3.8 HDAC1 ETV1 BMI1 ZBTB40 CTBP1 GATA3 ELK1 IKZF2 RUNX3 TCF7L2 RALBP1 RAB31 ANKRD12 VAPA GC18P009504
GH18I009488 Enhancer 0.4 Ensembl 0.4 -14.3 -14298 0.2 FOXA3 HLF GC18P009504 RALBP1
GH18I009485 Enhancer 0.4 Ensembl 0.4 -18.1 -18098 0.2 MITF CEBPA NR2F6 ENSG00000266805 RALBP1 GC18P009504
GH18I009479 Promoter 0.5 EPDnew 0.3 -24.1 -24088 0.1 RALBP1 GC18P009504
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC18P009504 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC18P009504 Gene

Genomic Locations for GC18P009504 Gene
chr18:9,503,199-9,503,231
(GRCh38/hg38)
Size:
33 bases
Orientation:
Plus strand
chr18:9,503,197-9,503,229
(GRCh37/hg19)

Genomic View for GC18P009504 Gene

Genes around GC18P009504 on UCSC Golden Path with GeneCards custom track

GC18P009504 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC18P009504 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC18P009504 Gene

ORGUL Member Location for GC18P009504 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC18P009504 Gene

Proteins for GC18P009504 Gene

Post-translational modifications for GC18P009504 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC18P009504 Gene

Domains & Families for GC18P009504 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC18P009504 Gene

Function for GC18P009504 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC18P009504 Gene

Localization for GC18P009504 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC18P009504 Gene

Pathways & Interactions for GC18P009504 Gene

SuperPathways for GC18P009504 Gene

No Data Available

Interacting Proteins for GC18P009504 Gene

Gene Ontology (GO) - Biological Process for GC18P009504 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC18P009504 Gene

Drugs & Compounds for GC18P009504 Gene

No Compound Related Data Available

Transcripts for GC18P009504 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC18P009504 Gene

No ASD Table

Relevant External Links for GC18P009504 Gene

GeneLoc Exon Structure for
GC18P009504

No data available for mRNA/cDNA for GC18P009504 Gene

Expression for GC18P009504 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC18P009504 Gene

Orthologs for GC18P009504 Gene

No data available for Orthologs and Evolution for GC18P009504 Gene

Paralogs for GC18P009504 Gene

No data available for Paralogs for GC18P009504 Gene

Variants for GC18P009504 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC18P009504 Gene

Disorders for GC18P009504 Gene

No disorders were found for GC18P009504 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC18P009504 Gene

Publications for GC18P009504 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC18P009504 Gene

Sources for GC18P009504 Gene

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