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Aliases for GC17P080985 Gene

Subcategory (RNA class) for GC17P080985 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC17P080985 Gene

No Aliases found

ORGUL Members for GC17P080985 Gene

No data available for External Ids for GC17P080985 Gene

Summaries for GC17P080985 Gene

GeneCards Summary for GC17P080985 Gene

GC17P080985 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC17P080985 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC17P080985 Gene

Genomics for GC17P080985 Gene

GeneHancer (GH) Regulatory Elements for GC17P080985 Gene

Promoters and enhancers for GC17P080985 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J080983 Enhancer 1 FANTOM5 Ensembl ENCODE 650.7 -1.0 -1010 1.7 USF1 BHLHE40 USF2 MNT REST NR2F2 TEAD3 MITF RAD51 IKZF1 GC17P080985 CHMP6 LOC400627 RPL12P37
GH17J080986 Enhancer 1 Ensembl ENCODE dbSUPER 650.7 +1.8 1778 1.1 TFAP4 RNF2 MIER2 ZIC2 ZNF354B KAT8 POLR2A THAP11 GC17P080985 FAAP100 CHMP6
GH17J080980 Enhancer 1.2 Ensembl dbSUPER 0.7 -4.1 -4082 2.2 HDGF PKNOX1 ATF1 GLI4 GLIS2 ZNF207 ZNF143 ZFP91 ATF7 FOS TEPSIN EIF4A3 CHMP6 ALYREF FAAP100 HGS ARL16 ENSG00000262877 LOC100130370 AATK
GH17J080991 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 +6.9 6887 2.6 HDGF ATF1 ARNT ARID4B SIN3A BRCA1 YY1 SLC30A9 GTF3C2 GLIS2 CHMP6 HGS TEPSIN EIF4A3 FAAP100 ALYREF ENSG00000262877 SIRT7 CCDC137 ENSG00000263218
GH17J080988 Enhancer 1.1 Ensembl ENCODE 0.7 +3.8 3768 1.1 ATF1 ARNT ZNF48 GLIS2 ARID2 ZNF143 ZFP91 KLF7 ATF7 NFKBIZ CHMP6 GC17P080985
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P080985 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P080985 Gene

Genomic Locations for GC17P080985 Gene
chr17:80,985,558-80,991,676
(GRCh38/hg38)
Size:
6,119 bases
Orientation:
Plus strand

Genomic View for GC17P080985 Gene

Genes around GC17P080985 on UCSC Golden Path with GeneCards custom track

GC17P080985 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P080985 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P080985 Gene

Proteins for GC17P080985 Gene

Post-translational modifications for GC17P080985 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P080985 Gene

Domains & Families for GC17P080985 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P080985 Gene

Function for GC17P080985 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P080985 Gene

Localization for GC17P080985 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P080985 Gene

Pathways & Interactions for GC17P080985 Gene

SuperPathways for GC17P080985 Gene

No Data Available

Interacting Proteins for GC17P080985 Gene

Gene Ontology (GO) - Biological Process for GC17P080985 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P080985 Gene

Drugs & Compounds for GC17P080985 Gene

No Compound Related Data Available

Transcripts for GC17P080985 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P080985 Gene

No ASD Table

Relevant External Links for GC17P080985 Gene

GeneLoc Exon Structure for
GC17P080985

No data available for mRNA/cDNA for GC17P080985 Gene

Expression for GC17P080985 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P080985 Gene

Orthologs for GC17P080985 Gene

No data available for Orthologs and Evolution for GC17P080985 Gene

Paralogs for GC17P080985 Gene

No data available for Paralogs for GC17P080985 Gene

Variants for GC17P080985 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P080985 Gene

Disorders for GC17P080985 Gene

No disorders were found for GC17P080985 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P080985 Gene

Publications for GC17P080985 Gene

No publications were found for GC17P080985 Gene.

Products for GC17P080985 Gene

Sources for GC17P080985 Gene

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