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Aliases for GC17P080040 Gene

Subcategory (RNA class) for GC17P080040 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for GC17P080040 Gene

No Aliases found

ORGUL Members for GC17P080040 Gene

No data available for External Ids for GC17P080040 Gene

Summaries for GC17P080040 Gene

GeneCards Summary for GC17P080040 Gene

GC17P080040 is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for GC17P080040 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC17P080040 Gene

Genomics for GC17P080040 Gene

GeneHancer (GH) Regulatory Elements for GC17P080040 Gene

Promoters and enhancers for GC17P080040 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J080064 Enhancer 1.1 Ensembl ENCODE 0.3 +24.2 24171 0.8 ARID4B DMAP1 NFXL1 RAD21 THRB ZNF614 GLIS2 FOS ATF7 THAP11 EIF4A3 CCDC40 CARD14 LOC100294362 TBC1D16 GC17P080040 MIR1268B
GH17J080068 Enhancer 1.1 Ensembl ENCODE 0.3 +29.9 29912 3.8 PKNOX1 FOXA2 ZFP64 ARID4B DMAP1 ZNF48 YY1 ZNF121 FOS ATF7 EIF4A3 GAA CCDC40 TBC1D16 CBX2 GC17P080040 MIR1268B
GH17J080082 Enhancer 0.9 Ensembl ENCODE 0.3 +42.6 42576 1.1 CTCF ZFP64 ARID4B SIN3A RAD21 E4F1 TEAD3 HIC1 PATZ1 SMC3 EIF4A3 GAA CARD14 MIR1268B GC17P080040 CCDC40
GH17J080053 Enhancer 0.4 ENCODE 0.4 +13.7 13655 0 PRDM4 NR2C2 GC17P080040 CCDC40 MIR1268B
GH17J080063 Enhancer 0.5 ENCODE 0.3 +23.7 23672 0.1 SP1 ZGPAT SKIL ZNF792 DMAP1 GAA GC17P080040 CCDC40 MIR1268B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P080040 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P080040 Gene

Genomic Locations for GC17P080040 Gene
chr17:80,040,305-80,052,787
(GRCh38/hg38)
Size:
12,483 bases
Orientation:
Plus strand

Genomic View for GC17P080040 Gene

Genes around GC17P080040 on UCSC Golden Path with GeneCards custom track

GC17P080040 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P080040 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P080040 Gene

Proteins for GC17P080040 Gene

Post-translational modifications for GC17P080040 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P080040 Gene

Domains & Families for GC17P080040 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P080040 Gene

Function for GC17P080040 Gene

Phenotypes From GWAS Catalog for GC17P080040 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P080040 Gene

Localization for GC17P080040 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P080040 Gene

Pathways & Interactions for GC17P080040 Gene

SuperPathways for GC17P080040 Gene

No Data Available

Interacting Proteins for GC17P080040 Gene

Gene Ontology (GO) - Biological Process for GC17P080040 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P080040 Gene

Drugs & Compounds for GC17P080040 Gene

No Compound Related Data Available

Transcripts for GC17P080040 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P080040 Gene

No ASD Table

Relevant External Links for GC17P080040 Gene

GeneLoc Exon Structure for
GC17P080040

No data available for mRNA/cDNA for GC17P080040 Gene

Expression for GC17P080040 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P080040 Gene

Orthologs for GC17P080040 Gene

No data available for Orthologs and Evolution for GC17P080040 Gene

Paralogs for GC17P080040 Gene

No data available for Paralogs for GC17P080040 Gene

Variants for GC17P080040 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P080040 Gene

Disorders for GC17P080040 Gene

No disorders were found for GC17P080040 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P080040 Gene

Publications for GC17P080040 Gene

No publications were found for GC17P080040 Gene.

Products for GC17P080040 Gene

Sources for GC17P080040 Gene

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