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Aliases for GC17P068795 Gene

Subcategory (RNA class) for GC17P068795 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for GC17P068795 Gene

No Aliases found

ORGUL Members for GC17P068795 Gene

No data available for External Ids for GC17P068795 Gene

Summaries for GC17P068795 Gene

GeneCards Summary for GC17P068795 Gene

GC17P068795 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC17P068795 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC17P068795

Additional gene information for GC17P068795 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P068795 Gene

Genomics for GC17P068795 Gene

GeneHancer (GH) Regulatory Elements for GC17P068795 Gene

Promoters and enhancers for GC17P068795 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I068790 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.8 -2.5 -2516 6.5 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 ATF7 FOS RUNX3 ABCA10 ABCA8 ABCA9 ENSG00000267250 GC17P068795 LOC105371877
GH17I068773 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -19.5 -19456 5 FOXA2 MLX ZFP64 ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 FOS ABCA10 ABCA8 BPTF ABCA9 ABCA6 WIPI1 LINC01482 GC17P068795 LOC105371877
GH17I068758 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 -36.2 -36223 2 HDGF FOXA2 MLX ARNT ARID4B NEUROD1 SIN3A DMAP1 ZBTB7B YY1 LOC105371877 GC17P068795 LINC01482
GH17I068771 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -23.8 -23754 1.4 MEIS2 CTCF PKNOX1 USF1 SAP130 MAX BATF RAD21 ZNF143 SMC3 ABCA10 ABCA6 ABCA8 LINC01482 GC17P068795 LOC105371877
GH17I068782 Enhancer 0.5 ENCODE dbSUPER 0.4 -12.1 -12075 2.4 ZNF350 ABCA10 BPTF ABCA8 GC17P068795 LOC105371877
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P068795 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P068795 Gene

Genomic Locations for GC17P068795 Gene
chr17:68,795,877-68,795,907
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand

Genomic View for GC17P068795 Gene

Genes around GC17P068795 on UCSC Golden Path with GeneCards custom track

GC17P068795 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P068795 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P068795 Gene

ORGUL Member Location for GC17P068795 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P068795 Gene

Proteins for GC17P068795 Gene

Post-translational modifications for GC17P068795 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P068795 Gene

Domains & Families for GC17P068795 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P068795 Gene

Function for GC17P068795 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P068795 Gene

Localization for GC17P068795 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P068795 Gene

Pathways & Interactions for GC17P068795 Gene

SuperPathways for GC17P068795 Gene

No Data Available

Interacting Proteins for GC17P068795 Gene

Gene Ontology (GO) - Biological Process for GC17P068795 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P068795 Gene

Drugs & Compounds for GC17P068795 Gene

No Compound Related Data Available

Transcripts for GC17P068795 Gene

fRNAdb Secondary structures for GC17P068795 Gene

  • FR061535
  • FR319201

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P068795 Gene

No ASD Table

Relevant External Links for GC17P068795 Gene

GeneLoc Exon Structure for
GC17P068795

No data available for mRNA/cDNA for GC17P068795 Gene

Expression for GC17P068795 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P068795 Gene

Orthologs for GC17P068795 Gene

No data available for Orthologs and Evolution for GC17P068795 Gene

Paralogs for GC17P068795 Gene

No data available for Paralogs for GC17P068795 Gene

Variants for GC17P068795 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P068795 Gene

Disorders for GC17P068795 Gene

No disorders were found for GC17P068795 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P068795 Gene

Publications for GC17P068795 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC17P068795 Gene

Sources for GC17P068795 Gene

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