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Aliases for GC17P067378 Gene

Subcategory (RNA class) for GC17P067378 Gene

lncRNA

Quality Score for this RNA gene is

6

Aliases for GC17P067378 Gene

No Aliases found

ORGUL Members for GC17P067378 Gene

No data available for External Ids for GC17P067378 Gene

Summaries for GC17P067378 Gene

GeneCards Summary for GC17P067378 Gene

GC17P067378 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC17P067378 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC17P067378

Additional gene information for GC17P067378 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P067378 Gene

Genomics for GC17P067378 Gene

GeneHancer (GH) Regulatory Elements for GC17P067378 Gene

Promoters and enhancers for GC17P067378 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I067375 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.6 556 4.1 HDGF ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 ZNF143 ZNF263 PITPNC1 GC17P067378 GC17P067379 HELZ NOL11 BPTF ENSG00000201547
GH17I067388 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.2 14211 5.6 PKNOX1 FOXA2 SMAD1 IRF4 YY1 ZNF121 E2F8 ATF7 FOS RUNX3 HELZ NOL11 BPTF PITPNC1 GC17P067379 GC17P067378 ENSG00000201547
GH17I067386 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +10.1 10114 1.8 ELF3 CTCF RB1 CHD4 FEZF1 RAD21 TEAD3 GATA3 ZNF143 SMC3 PITPNC1 GC17P067379 GC17P067378 ENSG00000201547
GH17I067399 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +24.5 24469 4.2 HDGF FOXA2 NFIB FEZF1 ZBTB7B YY1 SCRT2 RCOR1 RXRA CEBPB PSMD12 MIR548D2 MIR548AA2 PITPNC1 ENSG00000201547 GC17P067378 GC17P067379
GH17I067380 Enhancer 0.7 dbSUPER 0.4 +5.1 5090 3.4 FOXA2 RXRA HLF REST RAD21 ZNF592 FOXA1 YY1 ARID3A ZNF512B GC17P067378 GC17P067379 PITPNC1 ENSG00000201547
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P067378 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P067378 Gene

Genomic Locations for GC17P067378 Gene
chr17:67,377,318-67,377,833
(GRCh38/hg38)
Size:
516 bases
Orientation:
Plus strand

Genomic View for GC17P067378 Gene

Genes around GC17P067378 on UCSC Golden Path with GeneCards custom track

GC17P067378 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P067378 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P067378 Gene

ORGUL Member Location for GC17P067378 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P067378 Gene

Proteins for GC17P067378 Gene

Post-translational modifications for GC17P067378 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P067378 Gene

Domains & Families for GC17P067378 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P067378 Gene

Function for GC17P067378 Gene

Phenotypes From GWAS Catalog for GC17P067378 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P067378 Gene

Localization for GC17P067378 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P067378 Gene

Pathways & Interactions for GC17P067378 Gene

SuperPathways for GC17P067378 Gene

No Data Available

Interacting Proteins for GC17P067378 Gene

Gene Ontology (GO) - Biological Process for GC17P067378 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P067378 Gene

Drugs & Compounds for GC17P067378 Gene

No Compound Related Data Available

Transcripts for GC17P067378 Gene

fRNAdb Secondary structures for GC17P067378 Gene

  • FR032406

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P067378 Gene

No ASD Table

Relevant External Links for GC17P067378 Gene

GeneLoc Exon Structure for
GC17P067378

No data available for mRNA/cDNA for GC17P067378 Gene

Expression for GC17P067378 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P067378 Gene

Orthologs for GC17P067378 Gene

No data available for Orthologs and Evolution for GC17P067378 Gene

Paralogs for GC17P067378 Gene

No data available for Paralogs for GC17P067378 Gene

Variants for GC17P067378 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P067378 Gene

Disorders for GC17P067378 Gene

No disorders were found for GC17P067378 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P067378 Gene

Publications for GC17P067378 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC17P067378 Gene

Sources for GC17P067378 Gene

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