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Aliases for GC17P063754 Gene

Subcategory (RNA class) for GC17P063754 Gene

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Quality Score for this RNA gene is

13.2

Aliases for GC17P063754 Gene

No Aliases found

ORGUL Members for GC17P063754 Gene

No data available for External Ids for GC17P063754 Gene

Summaries for GC17P063754 Gene

GeneCards Summary for GC17P063754 Gene

GC17P063754 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC17P063754 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC17P063754

Additional gene information for GC17P063754 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P063754 Gene

Genomics for GC17P063754 Gene

GeneHancer (GH) Regulatory Elements for GC17P063754 Gene

Promoters and enhancers for GC17P063754 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J063752 Enhancer 0.8 ENCODE 650.7 -1.5 -1546 0.2 NCOA3 SIX4 CLOCK NFIB DDX20 PAX8 NFXL1 YBX1 ZBTB7B CTBP1 ENSG00000125695 GC17P063754 FTSJ3 POLG2 CEP95 SMARCD2 DDX5 DDX42 PSMC5 ERN1
GH17J063770 Enhancer 1.1 ENCODE dbSUPER 0.4 +15.9 15944 0.2 HDGF ATF1 ARNT NEUROD1 SIN3A TCF12 ELK1 ATF7 NCOA1 ZNF592 GC17M063765 DDX42 CCDC47 GC17P063754
GH17J063760 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +7.3 7286 1.5 SIX4 EGR1 COPS2 CEBPG EGR2 FTSJ3 PSMC5 LIMD2 SMARCD2 DDX42 GC17P063754 CCDC47
GH17J063757 Enhancer 0.3 dbSUPER 0.7 +3.3 3332 0.7 NONO FTSJ3 SMARCD2 DDX5 POLG2 DDX42 CEP95 ERN1 LIMD2 GC17P063754 CCDC47
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P063754 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P063754 Gene

Genomic Locations for GC17P063754 Gene
chr17:63,754,442-63,754,468
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand

Genomic View for GC17P063754 Gene

Genes around GC17P063754 on UCSC Golden Path with GeneCards custom track

GC17P063754 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P063754 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P063754 Gene

ORGUL Member Location for GC17P063754 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P063754 Gene

Proteins for GC17P063754 Gene

Post-translational modifications for GC17P063754 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P063754 Gene

Domains & Families for GC17P063754 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P063754 Gene

Function for GC17P063754 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P063754 Gene

Localization for GC17P063754 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P063754 Gene

Pathways & Interactions for GC17P063754 Gene

SuperPathways for GC17P063754 Gene

No Data Available

Interacting Proteins for GC17P063754 Gene

Gene Ontology (GO) - Biological Process for GC17P063754 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P063754 Gene

Drugs & Compounds for GC17P063754 Gene

No Compound Related Data Available

Transcripts for GC17P063754 Gene

fRNAdb Secondary structures for GC17P063754 Gene

  • FR327368

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P063754 Gene

No ASD Table

Relevant External Links for GC17P063754 Gene

GeneLoc Exon Structure for
GC17P063754

No data available for mRNA/cDNA for GC17P063754 Gene

Expression for GC17P063754 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P063754 Gene

Orthologs for GC17P063754 Gene

No data available for Orthologs and Evolution for GC17P063754 Gene

Paralogs for GC17P063754 Gene

No data available for Paralogs for GC17P063754 Gene

Variants for GC17P063754 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P063754 Gene

Disorders for GC17P063754 Gene

No disorders were found for GC17P063754 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P063754 Gene

Publications for GC17P063754 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC17P063754 Gene

Sources for GC17P063754 Gene

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