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Aliases for GC17P061299 Gene

Subcategory (RNA class) for GC17P061299 Gene


Quality Score for this RNA gene is


Aliases for GC17P061299 Gene

No Aliases found

ORGUL Members for GC17P061299 Gene

No data available for External Ids for GC17P061299 Gene

Summaries for GC17P061299 Gene

GeneCards Summary for GC17P061299 Gene

GC17P061299 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC17P061299 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC17P061299

Additional gene information for GC17P061299 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P061299 Gene

Genomics for GC17P061299 Gene

GeneHancer (GH) Regulatory Elements for GC17P061299 Gene

Promoters and enhancers for GC17P061299 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J061300 Enhancer 0.9 ENCODE dbSUPER 650.7 +1.2 1154 1.1 FOXA2 SAP130 MAX CEBPG ZBTB40 RAD21 GTF3C2 POLR3A GATAD2A TFE3 GC17P061299 MED13 PPM1D GC17P061333 BCAS3
GH17J061294 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -5.0 -4979 1.2 ZBTB21 ATF2 ZNF664 JUND ZNF629 CREB1 ZNF600 ATF7 TRIM28 GC17P061299 GC17P061257 BCAS3
GH17J061314 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.4 14354 1.8 CTCF SOX13 FOXA2 ARID4B FEZF1 GATA3 POLR2A ZSCAN5C PRDM10 RCOR1 TBX4 LOC101927855 GC17P061299 GC17P061333 BCAS3
GH17J061303 Enhancer 0.7 ENCODE dbSUPER 0.7 +3.7 3650 1 FOXA2 SCRT2 ERF ELF1 MAFK ZBTB26 ZKSCAN1 GC17P061299 GC17P061333 BCAS3
GH17J061283 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -14.6 -14624 3.2 SCRT1 SRF PKNOX1 NFATC3 GFI1B FEZF1 OSR2 JUND PRDM6 POLR2A NACA2 INTS2 GC17P061299 GC17P061257 BCAS3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P061299 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P061299 Gene

Genomic Locations for GC17P061299 Gene
178 bases
Plus strand

Genomic View for GC17P061299 Gene

Genes around GC17P061299 on UCSC Golden Path with GeneCards custom track

GC17P061299 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P061299 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P061299 Gene

ORGUL Member Location for GC17P061299 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P061299 Gene

Proteins for GC17P061299 Gene

Post-translational modifications for GC17P061299 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P061299 Gene

Domains & Families for GC17P061299 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P061299 Gene

Function for GC17P061299 Gene

Phenotypes From GWAS Catalog for GC17P061299 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P061299 Gene

Localization for GC17P061299 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P061299 Gene

Pathways & Interactions for GC17P061299 Gene

SuperPathways for GC17P061299 Gene

No Data Available

Interacting Proteins for GC17P061299 Gene

Gene Ontology (GO) - Biological Process for GC17P061299 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC17P061299 Gene

Drugs & Compounds for GC17P061299 Gene

No Compound Related Data Available

Transcripts for GC17P061299 Gene

fRNAdb Secondary structures for GC17P061299 Gene

  • FR237930
  • FR265937

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P061299 Gene

No ASD Table

Relevant External Links for GC17P061299 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC17P061299 Gene

Expression for GC17P061299 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P061299 Gene

Orthologs for GC17P061299 Gene

No data available for Orthologs and Evolution for GC17P061299 Gene

Paralogs for GC17P061299 Gene

No data available for Paralogs for GC17P061299 Gene

Variants for GC17P061299 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P061299 Gene

Disorders for GC17P061299 Gene

No disorders were found for GC17P061299 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P061299 Gene

Publications for GC17P061299 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC17P061299 Gene

Sources for GC17P061299 Gene

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