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Aliases for GC17P055380 Gene

Subcategory (RNA class) for GC17P055380 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for GC17P055380 Gene

No Aliases found

ORGUL Members for GC17P055380 Gene

No data available for External Ids for GC17P055380 Gene

Summaries for GC17P055380 Gene

GeneCards Summary for GC17P055380 Gene

GC17P055380 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC17P055380 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC17P055380 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P055380 Gene

Genomics for GC17P055380 Gene

GeneHancer (GH) Regulatory Elements for GC17P055380 Gene

Promoters and enhancers for GC17P055380 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I055343 Enhancer 0.9 ENCODE 0.3 -36.4 -36428 2.5 HDGF ATF1 PKNOX1 SMAD1 FOXA2 ARNT ZBTB7B TCF12 ZNF766 GATA2 HLF MMD ENSG00000262079 GC17P055380
GH17I055384 Enhancer 0.3 ENCODE 0.8 +3.8 3755 1.3 RCOR1 MMD GC17P055380 GC17M055389
GH17I055356 Enhancer 0.8 ENCODE 0.3 -24.0 -23988 0.2 PKNOX1 FOXA2 RB1 SIN3A DNMT3B RAD21 ARID2 ZNF143 RCOR1 ATF7 MMD GC17P055380 ENSG00000262079
GH17I055348 Enhancer 0.8 ENCODE 0.3 -32.0 -31958 0.2 ELF3 RB1 MLX ARID4B RAD21 YY1 ARID2 ZNF143 THAP11 MIXL1 HLF MMD ENSG00000262079 GC17P055380
GH17I055341 Enhancer 0.7 ENCODE 0.3 -39.2 -39218 0.2 SRF PKNOX1 CBFB JUNB DPF2 BATF ATF2 IRF4 ZBTB40 RELA ENSG00000262079 GC17P055380
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P055380 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P055380 Gene

Genomic Locations for GC17P055380 Gene
chr17:55,380,893-55,382,833
(GRCh38/hg38)
Size:
1,941 bases
Orientation:
Plus strand

Genomic View for GC17P055380 Gene

Genes around GC17P055380 on UCSC Golden Path with GeneCards custom track

GC17P055380 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P055380 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P055380 Gene

Proteins for GC17P055380 Gene

Post-translational modifications for GC17P055380 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P055380 Gene

Domains & Families for GC17P055380 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P055380 Gene

Function for GC17P055380 Gene

Phenotypes From GWAS Catalog for GC17P055380 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P055380 Gene

Localization for GC17P055380 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P055380 Gene

Pathways & Interactions for GC17P055380 Gene

SuperPathways for GC17P055380 Gene

No Data Available

Interacting Proteins for GC17P055380 Gene

Gene Ontology (GO) - Biological Process for GC17P055380 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P055380 Gene

Drugs & Compounds for GC17P055380 Gene

No Compound Related Data Available

Transcripts for GC17P055380 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P055380 Gene

No ASD Table

Relevant External Links for GC17P055380 Gene

GeneLoc Exon Structure for
GC17P055380

No data available for mRNA/cDNA for GC17P055380 Gene

Expression for GC17P055380 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P055380 Gene

Orthologs for GC17P055380 Gene

No data available for Orthologs and Evolution for GC17P055380 Gene

Paralogs for GC17P055380 Gene

No data available for Paralogs for GC17P055380 Gene

Variants for GC17P055380 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P055380 Gene

Disorders for GC17P055380 Gene

No disorders were found for GC17P055380 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P055380 Gene

Publications for GC17P055380 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC17P055380 Gene

Sources for GC17P055380 Gene

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