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Aliases for GC17P054919 Gene

Subcategory (RNA class) for GC17P054919 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC17P054919 Gene

No Aliases found

ORGUL Members for GC17P054919 Gene

No data available for External Ids for GC17P054919 Gene

Summaries for GC17P054919 Gene

GeneCards Summary for GC17P054919 Gene

GC17P054919 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC17P054919 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC17P054919 Gene

Genomics for GC17P054919 Gene

GeneHancer (GH) Regulatory Elements for GC17P054919 Gene

Promoters and enhancers for GC17P054919 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J054898 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 0.4 -17.8 -17816 5.2 ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF213 ZNF548 SP3 SP5 MXD4 TOM1L1 STXBP4 COX11 GC17P054919
GH17J054906 Enhancer 0.6 ENCODE 0.4 -11.8 -11805 1.9 TEAD4 TAL1 MAFG CBFA2T3 TCF12 SP1 ZNF316 HDAC2 CBFA2T2 EMSY STXBP4 COX11 TOM1L1 GC17P054919
GH17J054947 Enhancer 0.7 ENCODE 0.3 +29.9 29869 3.7 ELF3 SOX13 FOXA2 SAP130 CEBPG ZNF644 RARA ZNF614 FOS HOMEZ COX11 STXBP4 ENSG00000279059 GC17P054919 TOM1L1
GH17J054944 Enhancer 0.6 ENCODE 0.3 +26.0 26041 2.2 SMARCE1 MEIS2 PKNOX1 CBFA2T3 DPF2 BRF2 ZNF316 IKZF1 NFE2 MLLT1 COX11 STXBP4 ENSG00000279059 GC17P054919 TOM1L1
GH17J054957 Enhancer 0.3 FANTOM5 0.3 +38.6 38563 0.2 ENSG00000279059 COX11 GC17P054919 TOM1L1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P054919 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P054919 Gene

Genomic Locations for GC17P054919 Gene
chr17:54,919,157-54,939,096
(GRCh38/hg38)
Size:
19,940 bases
Orientation:
Plus strand

Genomic View for GC17P054919 Gene

Genes around GC17P054919 on UCSC Golden Path with GeneCards custom track

GC17P054919 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P054919 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P054919 Gene

Proteins for GC17P054919 Gene

Post-translational modifications for GC17P054919 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P054919 Gene

Domains & Families for GC17P054919 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P054919 Gene

Function for GC17P054919 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P054919 Gene

Localization for GC17P054919 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P054919 Gene

Pathways & Interactions for GC17P054919 Gene

SuperPathways for GC17P054919 Gene

No Data Available

Interacting Proteins for GC17P054919 Gene

Gene Ontology (GO) - Biological Process for GC17P054919 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P054919 Gene

Drugs & Compounds for GC17P054919 Gene

No Compound Related Data Available

Transcripts for GC17P054919 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P054919 Gene

No ASD Table

Relevant External Links for GC17P054919 Gene

GeneLoc Exon Structure for
GC17P054919

No data available for mRNA/cDNA for GC17P054919 Gene

Expression for GC17P054919 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P054919 Gene

Orthologs for GC17P054919 Gene

No data available for Orthologs and Evolution for GC17P054919 Gene

Paralogs for GC17P054919 Gene

No data available for Paralogs for GC17P054919 Gene

Variants for GC17P054919 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P054919 Gene

Disorders for GC17P054919 Gene

No disorders were found for GC17P054919 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P054919 Gene

Publications for GC17P054919 Gene

No publications were found for GC17P054919 Gene.

Products for GC17P054919 Gene

Sources for GC17P054919 Gene

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