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Aliases for GC17P045196 Gene

Subcategory (RNA class) for GC17P045196 Gene

lncRNA

Quality Score for this RNA gene is

0.2

Aliases for GC17P045196 Gene

No Aliases found

ORGUL Members for GC17P045196 Gene

No data available for External Ids for GC17P045196 Gene

Summaries for GC17P045196 Gene

GeneCards Summary for GC17P045196 Gene

GC17P045196 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC17P045196 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC17P045196

Additional gene information for GC17P045196 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P045196 Gene

Genomics for GC17P045196 Gene

GeneHancer (GH) Regulatory Elements for GC17P045196 Gene

Promoters and enhancers for GC17P045196 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I045196 Enhancer 1.3 Ensembl ENCODE 0.8 +2.3 2284 1.9 HDGF MLX ARNT ARID4B SIN3A ZNF2 ZNF207 ZNF143 DEK SP3 ENSG00000262372 UBTF HEXIM1 PLCD3 ACBD4 ENSG00000224505 DCAKD ENSG00000233483 ENSG00000267405 GC17P045196
GH17I045200 Enhancer 1.1 Ensembl ENCODE 0.4 +6.1 6134 2.1 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 TCF12 SLC30A9 ATF7 HEXIM1 PLCD3 ACBD4 DCAKD LRRC37A4P ENSG00000233483 DND1P1 ENSG00000233175 LINC02210 ENSG00000267405
GH17I045218 Enhancer 1 ENCODE dbSUPER 0.3 +23.6 23619 0.2 ELF3 PKNOX1 RB1 ARNT ARID4B SIN3A ZNF2 RAD21 ZEB1 ARID2 LOC339192 FMNL1 GC17P045196
GH17I045219 Enhancer 0.7 ENCODE dbSUPER 0.3 +24.0 24009 0.2 CTCF SKIL ARNT ZNF629 REST ZEB2 FMNL1 LOC339192 GC17P045196
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P045196 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P045196 Gene

Genomic Locations for GC17P045196 Gene
chr17:45,195,460-45,196,078
(GRCh38/hg38)
Size:
619 bases
Orientation:
Plus strand

Genomic View for GC17P045196 Gene

Genes around GC17P045196 on UCSC Golden Path with GeneCards custom track

GC17P045196 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P045196 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P045196 Gene

ORGUL Member Location for GC17P045196 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P045196 Gene

Proteins for GC17P045196 Gene

Post-translational modifications for GC17P045196 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P045196 Gene

Domains & Families for GC17P045196 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P045196 Gene

Function for GC17P045196 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P045196 Gene

Localization for GC17P045196 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P045196 Gene

Pathways & Interactions for GC17P045196 Gene

SuperPathways for GC17P045196 Gene

No Data Available

Interacting Proteins for GC17P045196 Gene

Gene Ontology (GO) - Biological Process for GC17P045196 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P045196 Gene

Drugs & Compounds for GC17P045196 Gene

No Compound Related Data Available

Transcripts for GC17P045196 Gene

fRNAdb Secondary structures for GC17P045196 Gene

  • FR082649

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P045196 Gene

No ASD Table

Relevant External Links for GC17P045196 Gene

GeneLoc Exon Structure for
GC17P045196

No data available for mRNA/cDNA for GC17P045196 Gene

Expression for GC17P045196 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P045196 Gene

Orthologs for GC17P045196 Gene

No data available for Orthologs and Evolution for GC17P045196 Gene

Paralogs for GC17P045196 Gene

No data available for Paralogs for GC17P045196 Gene

Variants for GC17P045196 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P045196 Gene

Disorders for GC17P045196 Gene

No disorders were found for GC17P045196 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P045196 Gene

Publications for GC17P045196 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC17P045196 Gene

Sources for GC17P045196 Gene

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