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Aliases for GC17P044955 Gene

Subcategory (RNA class) for GC17P044955 Gene

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Quality Score for this RNA gene is

13.4

Aliases for GC17P044955 Gene

No Aliases found

ORGUL Members for GC17P044955 Gene

No data available for External Ids for GC17P044955 Gene

Summaries for GC17P044955 Gene

GeneCards Summary for GC17P044955 Gene

GC17P044955 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC17P044955 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC17P044955

Additional gene information for GC17P044955 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P044955 Gene

Genomics for GC17P044955 Gene

GeneHancer (GH) Regulatory Elements for GC17P044955 Gene

Promoters and enhancers for GC17P044955 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J044959 Enhancer 0.8 Ensembl ENCODE 0.7 +4.5 4497 1.4 STAT1 NFIA KLF17 CEBPB ZFHX2 MAFF NFIC POLR2A IKZF1 RCOR1 EFTUD2 ENSG00000267505 GC17P044955 C1QL1 GC17P044954
GH17J044957 Enhancer 0.7 FANTOM5 0.7 +2.1 2080 0.4 SAP130 DMAP1 ZIC2 ZNF644 KAT8 POLR2A GLIS1 RCOR1 NR2F6 KDM1A GFAP HIGD1B ADAM11 ACBD4 DCAKD GC17P044954 GC17P044955 C1QL1
GH17J044971 Promoter 0.8 EPDnew 0.4 +12.4 12395 0.1 FOXM1 E2F1 E2F6 EZH2 C1QL1 GC17P044954 GC17P044955
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P044955 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P044955 Gene

Genomic Locations for GC17P044955 Gene
chr17:44,955,705-44,955,863
(GRCh38/hg38)
Size:
159 bases
Orientation:
Plus strand

Genomic View for GC17P044955 Gene

Genes around GC17P044955 on UCSC Golden Path with GeneCards custom track

GC17P044955 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P044955 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P044955 Gene

ORGUL Member Location for GC17P044955 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P044955 Gene

Proteins for GC17P044955 Gene

Post-translational modifications for GC17P044955 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P044955 Gene

Domains & Families for GC17P044955 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P044955 Gene

Function for GC17P044955 Gene

Phenotypes From GWAS Catalog for GC17P044955 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P044955 Gene

Localization for GC17P044955 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P044955 Gene

Pathways & Interactions for GC17P044955 Gene

SuperPathways for GC17P044955 Gene

No Data Available

Interacting Proteins for GC17P044955 Gene

Gene Ontology (GO) - Biological Process for GC17P044955 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P044955 Gene

Drugs & Compounds for GC17P044955 Gene

No Compound Related Data Available

Transcripts for GC17P044955 Gene

fRNAdb Secondary structures for GC17P044955 Gene

  • FR017853
  • FR254424

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P044955 Gene

No ASD Table

Relevant External Links for GC17P044955 Gene

GeneLoc Exon Structure for
GC17P044955

No data available for mRNA/cDNA for GC17P044955 Gene

Expression for GC17P044955 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P044955 Gene

Orthologs for GC17P044955 Gene

No data available for Orthologs and Evolution for GC17P044955 Gene

Paralogs for GC17P044955 Gene

No data available for Paralogs for GC17P044955 Gene

Variants for GC17P044955 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P044955 Gene

Disorders for GC17P044955 Gene

No disorders were found for GC17P044955 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P044955 Gene

Publications for GC17P044955 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for GC17P044955 Gene

Sources for GC17P044955 Gene

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