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Aliases for GC17P044352 Gene

Subcategory (RNA class) for GC17P044352 Gene

lncRNA

Quality Score for this RNA gene is

6

Aliases for GC17P044352 Gene

No Aliases found

No data available for External Ids for GC17P044352 Gene

Summaries for GC17P044352 Gene

GeneCards Summary for GC17P044352 Gene

GC17P044352 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC17P044352 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

View fRNAdb secondary structures for GC17P044352

Additional gene information for GC17P044352 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17P044352 Gene

Genomics for GC17P044352 Gene

GeneHancer (GH) Regulatory Elements for GC17P044352 Gene

Promoters and enhancers for GC17P044352 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I044352 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 +1.6 1638 2.8 ELF3 CTCF TFAP4 ZNF792 SAP130 ARID4B SIN3A RAD21 ZNF48 ZBTB40 GC17P044352 GC17P044353 GRN FAM171A2
GH17I044350 Enhancer 0.8 ENCODE 550.8 -1.8 -1808 0.2 HDGF RB1 ARID4B ZNF2 IRF4 ZNF48 RAD21 GLIS2 ZNF143 BCLAF1 GC17P044352 GC17P044353 GRN
GH17I044344 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.6 -5588 5.5 PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 IRF4 YY1 POLR2B GRN UBTF SLC25A39 MEOX1 C17orf53 RUNDC3A-AS1 TMUB2 MAP3K14-AS1 LSM12 RUNDC3A
GH17I044359 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.4 +9.4 9400 4.5 SIN3A GLIS2 ZNF143 ATF7 SP3 ZNF592 RFX3 GLIS1 KDM1A WT1 FAM171A2 GRN KIF18B FAM187A GC17P044352 GC17P044353
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P044352 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P044352 Gene

Genomic Locations for GC17P044352 Gene
chr17:44,352,746-44,353,102
(GRCh38/hg38)
Size:
357 bases
Orientation:
Plus strand

Genomic View for GC17P044352 Gene

Genes around GC17P044352 on UCSC Golden Path with GeneCards custom track

GC17P044352 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P044352 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17P044352 Gene

ORGUL Member Location for GC17P044352 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P044352 Gene

Proteins for GC17P044352 Gene

Post-translational modifications for GC17P044352 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P044352 Gene

Domains & Families for GC17P044352 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P044352 Gene

Function for GC17P044352 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P044352 Gene

Localization for GC17P044352 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P044352 Gene

Pathways & Interactions for GC17P044352 Gene

SuperPathways for GC17P044352 Gene

No Data Available

Interacting Proteins for GC17P044352 Gene

Gene Ontology (GO) - Biological Process for GC17P044352 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P044352 Gene

Drugs & Compounds for GC17P044352 Gene

No Compound Related Data Available

Transcripts for GC17P044352 Gene

fRNAdb Secondary structures for GC17P044352 Gene

  • FR352881

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P044352 Gene

No ASD Table

Relevant External Links for GC17P044352 Gene

GeneLoc Exon Structure for
GC17P044352

No data available for mRNA/cDNA for GC17P044352 Gene

Expression for GC17P044352 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P044352 Gene

Orthologs for GC17P044352 Gene

No data available for Orthologs and Evolution for GC17P044352 Gene

Paralogs for GC17P044352 Gene

No data available for Paralogs for GC17P044352 Gene

Variants for GC17P044352 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P044352 Gene

Disorders for GC17P044352 Gene

No disorders were found for GC17P044352 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P044352 Gene

Publications for GC17P044352 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC17P044352 Gene

Sources for GC17P044352 Gene

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