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Aliases for GC17P030227 Gene

Subcategory (RNA class) for GC17P030227 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC17P030227 Gene

No Aliases found

ORGUL Members for GC17P030227 Gene

No data available for External Ids for GC17P030227 Gene

Summaries for GC17P030227 Gene

GeneCards Summary for GC17P030227 Gene

GC17P030227 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC17P030227 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC17P030227 Gene

Genomics for GC17P030227 Gene

GeneHancer (GH) Regulatory Elements for GC17P030227 Gene

Promoters and enhancers for GC17P030227 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I030225 Enhancer 0.8 ENCODE 550.8 -0.9 -917 2.4 FOXA2 ZFP64 ARID4B RAD21 RARA CREM THAP11 MIXL1 SP5 PPARG GC17P030227 CORO6 ENSG00000252112 RNU6-1267P BLMH TMIGD1 SLC6A4 ENSG00000264125
GH17I030222 Enhancer 0.8 Ensembl ENCODE 0.8 -4.0 -4041 1.8 GATAD2A HMG20B SAP130 ARID4B DMAP1 RAD21 KAT8 TGIF2 POLR2A HNF4A CORO6 ENSG00000252112 RNU6-1267P BLMH TMIGD1 SUZ12P1 GC17P030227 SLC6A4 ENSG00000264125
GH17I030235 Promoter/Enhancer 1.3 EPDnew Ensembl ENCODE 0.4 +8.6 8552 1.4 RING1 PKNOX1 ZNF687 SUZ12 MAX ZMYM3 ZNF121 CTBP1 GATA3 RUNX3 LOC105371720 SLC6A4 LRRC37BP1 SUZ12P1 GOSR1 ENSG00000265791 SMURF2P1 GC17P030227
GH17I030219 Enhancer 0.8 ENCODE 0.4 -7.1 -7146 1.9 HDAC1 ARID4B RARA TCF12 IKZF2 RUNX3 ZNF263 SP5 MXD4 ZEB2 CORO6 ENSG00000252112 RNU6-1267P BLMH TMIGD1 ENSG00000239129 SUZ12P1 EFCAB5 GC17P030227 ENSG00000264125
GH17I030228 Enhancer 0.3 ENCODE 0.8 +2.1 2077 0.8 SCRT2 GC17P030227 SLC6A4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17P030227 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17P030227 Gene

Genomic Locations for GC17P030227 Gene
chr17:30,227,148-30,276,685
(GRCh38/hg38)
Size:
49,538 bases
Orientation:
Plus strand

Genomic View for GC17P030227 Gene

Genes around GC17P030227 on UCSC Golden Path with GeneCards custom track

GC17P030227 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17P030227 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17P030227 Gene

Proteins for GC17P030227 Gene

Post-translational modifications for GC17P030227 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17P030227 Gene

Domains & Families for GC17P030227 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17P030227 Gene

Function for GC17P030227 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17P030227 Gene

Localization for GC17P030227 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17P030227 Gene

Pathways & Interactions for GC17P030227 Gene

SuperPathways for GC17P030227 Gene

No Data Available

Interacting Proteins for GC17P030227 Gene

Gene Ontology (GO) - Biological Process for GC17P030227 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17P030227 Gene

Drugs & Compounds for GC17P030227 Gene

No Compound Related Data Available

Transcripts for GC17P030227 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC17P030227 Gene

No ASD Table

Relevant External Links for GC17P030227 Gene

GeneLoc Exon Structure for
GC17P030227

No data available for mRNA/cDNA for GC17P030227 Gene

Expression for GC17P030227 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17P030227 Gene

Orthologs for GC17P030227 Gene

No data available for Orthologs and Evolution for GC17P030227 Gene

Paralogs for GC17P030227 Gene

No data available for Paralogs for GC17P030227 Gene

Variants for GC17P030227 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17P030227 Gene

Disorders for GC17P030227 Gene

No disorders were found for GC17P030227 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17P030227 Gene

Publications for GC17P030227 Gene

No publications were found for GC17P030227 Gene.

Products for GC17P030227 Gene

Sources for GC17P030227 Gene

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