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Aliases for GC17M008513 Gene

Subcategory (RNA class) for GC17M008513 Gene

tRNA

Quality Score for this RNA gene is

2

Aliases for GC17M008513 Gene

No Aliases found

No data available for External Ids for GC17M008513 Gene

Summaries for GC17M008513 Gene

GeneCards Summary for GC17M008513 Gene

GC17M008513 is an RNA Gene, and is affiliated with the tRNA class.

Additional gene information for GC17M008513 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC17M008513 Gene

Genomics for GC17M008513 Gene

GeneHancer (GH) Regulatory Elements for GC17M008513 Gene

Promoters and enhancers for GC17M008513 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I008220 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 550.8 -0.9 -912 5.2 MLX FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC GC17P008252 GC17M008513 GC17M008520 TRD-GTC2-11 TRG-TCC3-1 TRP-CGG1-3 TRW-CCA1-1 NEURL4 DVL2 PFAS
GH17I008219 Enhancer 1.1 ENCODE dbSUPER 0.8 +2.5 2483 0.6 ELF3 ATF1 FOXA2 NFRKB THRB ZNF48 ZSCAN9 RARA GTF3C2 ATF7 GC17M008513 TRW-CCA1-1 AURKB
GH17I008218 Enhancer 0.9 ENCODE dbSUPER 0.8 +2.0 2002 0.2 BCOR MEIS2 PKNOX1 ATF1 CEBPB ZNF384 CEBPG DPF2 OSR2 ATF4 GC17M008513 TRW-CCA1-1 AURKB
GH17I008212 Enhancer 1.1 ENCODE dbSUPER 0.4 +8.1 8082 0.2 PKNOX1 ARID4B DMAP1 GTF3C2 ZNF121 RXRA SP5 NFYC KAT8 NFIL3 NEURL4 SENP3 AURKB GC17M008513 TRW-CCA1-1
GH17I008215 Enhancer 0.3 ENCODE 0.4 +5.9 5882 0.2 ZNF384 AURKB GC17M008513 TRW-CCA1-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17M008513 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17M008513 Gene

Genomic Locations for GC17M008513 Gene
chr17:8,220,868-8,220,940
(GRCh38/hg38)
Size:
73 bases
Orientation:
Minus strand

Genomic View for GC17M008513 Gene

Genes around GC17M008513 on UCSC Golden Path with GeneCards custom track

GC17M008513 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17M008513 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17M008513 Gene

Proteins for GC17M008513 Gene

Post-translational modifications for GC17M008513 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17M008513 Gene

Domains & Families for GC17M008513 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17M008513 Gene

Function for GC17M008513 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17M008513 Gene

Localization for GC17M008513 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17M008513 Gene

Pathways & Interactions for GC17M008513 Gene

SuperPathways for GC17M008513 Gene

No Data Available

Interacting Proteins for GC17M008513 Gene

Gene Ontology (GO) - Biological Process for GC17M008513 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17M008513 Gene

Drugs & Compounds for GC17M008513 Gene

No Compound Related Data Available

Transcripts for GC17M008513 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC17M008513 Gene

No ASD Table

Relevant External Links for GC17M008513 Gene

GeneLoc Exon Structure for
GC17M008513

No data available for mRNA/cDNA for GC17M008513 Gene

Expression for GC17M008513 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17M008513 Gene

Orthologs for GC17M008513 Gene

No data available for Orthologs and Evolution for GC17M008513 Gene

Paralogs for GC17M008513 Gene

No data available for Paralogs for GC17M008513 Gene

Variants for GC17M008513 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17M008513 Gene

Disorders for GC17M008513 Gene

No disorders were found for GC17M008513 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17M008513 Gene

Publications for GC17M008513 Gene

  1. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. (PMID: 9023104) Lowe TM … Eddy SR (Nucleic acids research 1997) 1
  2. The tertiary structure of tRNA and the development of the genetic code. (PMID: 8256282) Hou YM (Trends in biochemical sciences 1993) 1

Products for GC17M008513 Gene

Sources for GC17M008513 Gene

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