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Aliases for GC17M002154 Gene

Subcategory (RNA class) for GC17M002154 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC17M002154 Gene

No Aliases found

ORGUL Members for GC17M002154 Gene

No data available for External Ids for GC17M002154 Gene

Summaries for GC17M002154 Gene

GeneCards Summary for GC17M002154 Gene

GC17M002154 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC17M002154 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC17M002154 Gene

Genomics for GC17M002154 Gene

GeneHancer (GH) Regulatory Elements for GC17M002154 Gene

Promoters and enhancers for GC17M002154 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I002184 Enhancer 0.2 FANTOM5 550.8 -1.2 -1209 0.3 GC17M002154 RN7SL624P GC17M002005 SMG6
GH17I002170 Enhancer 2.5 VISTA UCNEbase FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.1 6111 13.4 PKNOX1 FOXA2 ARID4B FEZF1 ZNF48 ETS1 YY1 ZNF121 ZNF213 KLF7 GC17P002179 SRR ENSG00000236838 HIC1 ENSG00000236457 LOC101927839 OVCA2 SNORD91A SNORD91B SMG6
GH17I002188 Enhancer 1.9 UCNEbase FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.9 -7940 5.2 TCF12 FOS IKZF2 RUNX3 EGR2 CEBPB ELF1 ZEB2 SP1 MAFF SRR ENSG00000236838 WDR81 GC17M002154 RN7SL624P GC17M002005 SMG6
GH17I002194 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -12.0 -12008 2 ZBTB21 NFIB SIN3A EBF1 ZFHX2 ATF7 FOS IKZF2 RUNX3 EGR2 HNRNPA1P16 METTL16 SRR ENSG00000263345 SMG6 SMYD4 RPA1 RN7SL624P GC17M002154 GC17M002005
GH17I002156 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +26.0 25977 2.8 ELF3 FOXA2 ZFP64 ARID4B DMAP1 RAD21 RARA YY1 CREM THAP11 ENSG00000236838 ENSG00000236457 LOC101927839 HIC1 OVCA2 SRR GC17M002152 PIR52499 GC17P002179 GC17M002154
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17M002154 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17M002154 Gene

Genomic Locations for GC17M002154 Gene
chr17:2,154,024-2,183,610
(GRCh38/hg38)
Size:
29,587 bases
Orientation:
Minus strand

Genomic View for GC17M002154 Gene

Genes around GC17M002154 on UCSC Golden Path with GeneCards custom track

GC17M002154 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17M002154 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17M002154 Gene

Proteins for GC17M002154 Gene

Post-translational modifications for GC17M002154 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17M002154 Gene

Domains & Families for GC17M002154 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17M002154 Gene

Function for GC17M002154 Gene

Phenotypes From GWAS Catalog for GC17M002154 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17M002154 Gene

Localization for GC17M002154 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17M002154 Gene

Pathways & Interactions for GC17M002154 Gene

SuperPathways for GC17M002154 Gene

No Data Available

Interacting Proteins for GC17M002154 Gene

Gene Ontology (GO) - Biological Process for GC17M002154 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17M002154 Gene

Drugs & Compounds for GC17M002154 Gene

No Compound Related Data Available

Transcripts for GC17M002154 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC17M002154 Gene

No ASD Table

Relevant External Links for GC17M002154 Gene

GeneLoc Exon Structure for
GC17M002154

No data available for mRNA/cDNA for GC17M002154 Gene

Expression for GC17M002154 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17M002154 Gene

Orthologs for GC17M002154 Gene

No data available for Orthologs and Evolution for GC17M002154 Gene

Paralogs for GC17M002154 Gene

No data available for Paralogs for GC17M002154 Gene

Variants for GC17M002154 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17M002154 Gene

Disorders for GC17M002154 Gene

No disorders were found for GC17M002154 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17M002154 Gene

Publications for GC17M002154 Gene

No publications were found for GC17M002154 Gene.

Products for GC17M002154 Gene

Sources for GC17M002154 Gene

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