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Aliases for GC17M002101 Gene

Subcategory (RNA class) for GC17M002101 Gene

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Quality Score for this RNA gene is

15

Aliases for GC17M002101 Gene

No Aliases found

ORGUL Members for GC17M002101 Gene

No data available for External Ids for GC17M002101 Gene

Summaries for GC17M002101 Gene

GeneCards Summary for GC17M002101 Gene

GC17M002101 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC17M002101 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

Additional gene information for GC17M002101 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17M002101 Gene

Genomics for GC17M002101 Gene

GeneHancer (GH) Regulatory Elements for GC17M002101 Gene

Promoters and enhancers for GC17M002101 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J002101 Enhancer 1.2 Ensembl ENCODE dbSUPER 650.7 0.0 -2 1 NFIB MZF1 FEZF1 ZNF366 ZSCAN5C SCRT2 ETV6 CEBPB ELF1 ZEB2 ENSG00000279040 GC17M002101 GC17P002103 METTL16 HNRNPA1P16 HIC1 OVCA2 ENSG00000236457 ENSG00000236838 SRR
GH17J002102 Enhancer 0.8 ENCODE dbSUPER 650.7 -1.6 -1615 1.4 SCRT1 ZNF146 ZNF362 ZSCAN21 JUND POLR2A SCRT2 PRDM10 ZNF600 ZBTB17 ENSG00000279040 GC17M002101 GC17P002103 SRR HIC1 OVCA2 ENSG00000236457 ENSG00000236838 DPH1 ENSG00000279562
GH17J002105 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -5.3 -5303 2 RXRA RUNX3 PRDM1 NR2F2 ENSG00000236457 ENSG00000236838 HIC1 OVCA2 LOC101927839 DPH1 SRR GC17M002101 ENSG00000279562 GC17M002005
GH17J002111 Enhancer 0.6 ENCODE 0.4 -10.2 -10194 1 SMARCE1 ZNF639 ZNF680 ZBTB21 ZNF189 ZNF223 MZF1 ZNF664 RBAK ZNF19 HNRNPA1P16 DPH1 HIC1 OVCA2 ENSG00000236457 ENSG00000236838 SMYD4 METTL16 SRR ENSG00000263345
GH17J002112 Enhancer 0.5 dbSUPER 0.4 -11.7 -11733 0.9 NR2F1 CEBPA ZBTB33 CEBPG IKZF2 ENSG00000236838 HIC1 OVCA2 SGSM2 TSR1 ENSG00000279562 GC17M002101 GC17M002005 SMG6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17M002101 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17M002101 Gene

Genomic Locations for GC17M002101 Gene
chr17:2,101,541-2,101,667
(GRCh38/hg38)
Size:
127 bases
Orientation:
Minus strand

Genomic View for GC17M002101 Gene

Genes around GC17M002101 on UCSC Golden Path with GeneCards custom track

GC17M002101 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17M002101 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC17M002101 Gene

Proteins for GC17M002101 Gene

Post-translational modifications for GC17M002101 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17M002101 Gene

Domains & Families for GC17M002101 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17M002101 Gene

Function for GC17M002101 Gene

Phenotypes From GWAS Catalog for GC17M002101 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17M002101 Gene

Localization for GC17M002101 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17M002101 Gene

Pathways & Interactions for GC17M002101 Gene

SuperPathways for GC17M002101 Gene

No Data Available

Interacting Proteins for GC17M002101 Gene

Gene Ontology (GO) - Biological Process for GC17M002101 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17M002101 Gene

Drugs & Compounds for GC17M002101 Gene

No Compound Related Data Available

Transcripts for GC17M002101 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC17M002101 Gene

No ASD Table

Relevant External Links for GC17M002101 Gene

GeneLoc Exon Structure for
GC17M002101

No data available for mRNA/cDNA for GC17M002101 Gene

Expression for GC17M002101 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17M002101 Gene

Orthologs for GC17M002101 Gene

No data available for Orthologs and Evolution for GC17M002101 Gene

Paralogs for GC17M002101 Gene

No data available for Paralogs for GC17M002101 Gene

Variants for GC17M002101 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17M002101 Gene

Disorders for GC17M002101 Gene

No disorders were found for GC17M002101 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17M002101 Gene

Publications for GC17M002101 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC17M002101 Gene

Sources for GC17M002101 Gene

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