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Aliases for GC17M002072 Gene

Subcategory (RNA class) for GC17M002072 Gene

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Quality Score for this RNA gene is

7

Aliases for GC17M002072 Gene

No Aliases found

ORGUL Members for GC17M002072 Gene

No data available for External Ids for GC17M002072 Gene

Summaries for GC17M002072 Gene

GeneCards Summary for GC17M002072 Gene

GC17M002072 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC17M002072 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

View fRNAdb secondary structures for GC17M002072

Additional gene information for GC17M002072 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17M002072 Gene

Genomics for GC17M002072 Gene

GeneHancer (GH) Regulatory Elements for GC17M002072 Gene

Promoters and enhancers for GC17M002072 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I002053 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.4 9448 20.4 HDGF PKNOX1 FOXA2 SMAD1 ARID4B SIN3A ZNF2 IRF4 YY1 ZNF213 HIC1 GC17M002060 DPH1 PRPF8 SMYD4 SRR METTL16 LOC101927839 HNRNPA1P16 ENSG00000236457
GH17I002074 Enhancer 1 Ensembl ENCODE dbSUPER 0.8 -3.4 -3377 4 STAT1 CBFB ZFP69B ZFHX2 PRDM6 GLIS2 ZNF692 POLR2A ZBTB33 RCOR1 GC17P002076 GC17M002069 SRR DPH1 GC17M002072 GC17M002073 GC17M002005 SMG6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17M002072 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17M002072 Gene

Genomic Locations for GC17M002072 Gene
chr17:2,072,822-2,072,886
(GRCh38/hg38)
Size:
65 bases
Orientation:
Minus strand

Genomic View for GC17M002072 Gene

Genes around GC17M002072 on UCSC Golden Path with GeneCards custom track

GC17M002072 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17M002072 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17M002072 Gene

ORGUL Member Location for GC17M002072 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17M002072 Gene

Proteins for GC17M002072 Gene

Post-translational modifications for GC17M002072 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17M002072 Gene

Domains & Families for GC17M002072 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17M002072 Gene

Function for GC17M002072 Gene

Phenotypes From GWAS Catalog for GC17M002072 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17M002072 Gene

Localization for GC17M002072 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17M002072 Gene

Pathways & Interactions for GC17M002072 Gene

SuperPathways for GC17M002072 Gene

No Data Available

Interacting Proteins for GC17M002072 Gene

Gene Ontology (GO) - Biological Process for GC17M002072 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17M002072 Gene

Drugs & Compounds for GC17M002072 Gene

No Compound Related Data Available

Transcripts for GC17M002072 Gene

fRNAdb Secondary structures for GC17M002072 Gene

  • FR043004

Alternative Splicing Database (ASD) splice patterns (SP) for GC17M002072 Gene

No ASD Table

Relevant External Links for GC17M002072 Gene

GeneLoc Exon Structure for
GC17M002072

No data available for mRNA/cDNA for GC17M002072 Gene

Expression for GC17M002072 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17M002072 Gene

Orthologs for GC17M002072 Gene

No data available for Orthologs and Evolution for GC17M002072 Gene

Paralogs for GC17M002072 Gene

No data available for Paralogs for GC17M002072 Gene

Variants for GC17M002072 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17M002072 Gene

Disorders for GC17M002072 Gene

No disorders were found for GC17M002072 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17M002072 Gene

Publications for GC17M002072 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

Products for GC17M002072 Gene

Sources for GC17M002072 Gene

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