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Aliases for GC17M001715 Gene

Subcategory (RNA class) for GC17M001715 Gene

miRNA

Quality Score for this RNA gene is

5.2

Aliases for GC17M001715 Gene

No Aliases found

No data available for External Ids for GC17M001715 Gene

Summaries for GC17M001715 Gene

GeneCards Summary for GC17M001715 Gene

GC17M001715 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC17M001715 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for GC17M001715

Additional gene information for GC17M001715 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC17M001715 Gene

Genomics for GC17M001715 Gene

GeneHancer (GH) Regulatory Elements for GC17M001715 Gene

Promoters and enhancers for GC17M001715 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I001712 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.8 -1787 7 MLX DMAP1 YBX1 YY1 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 WDR81 MIR22 MIR22HG GC17M001715 SMYD4 PRPF8 GEMIN4 RPA1 SERPINF2 METTL16
GH17I001709 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.8 +3.5 3516 2.1 ATF1 ARID4B SIN3A ZNF48 GLIS2 KLF7 ATF7 SP3 RXRA NFYC TLCD2 SERPINF2 GC17M001715 MIR22 MIR22HG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC17M001715 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC17M001715 Gene

Genomic Locations for GC17M001715 Gene
chr17:1,713,902-1,713,987
(GRCh38/hg38)
Size:
86 bases
Orientation:
Minus strand

Genomic View for GC17M001715 Gene

Genes around GC17M001715 on UCSC Golden Path with GeneCards custom track

GC17M001715 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC17M001715 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC17M001715 Gene

ORGUL Member Location for GC17M001715 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC17M001715 Gene

Proteins for GC17M001715 Gene

Post-translational modifications for GC17M001715 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC17M001715 Gene

Domains & Families for GC17M001715 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC17M001715 Gene

Function for GC17M001715 Gene

Phenotypes From GWAS Catalog for GC17M001715 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC17M001715 Gene

Localization for GC17M001715 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC17M001715 Gene

Pathways & Interactions for GC17M001715 Gene

SuperPathways for GC17M001715 Gene

No Data Available

Interacting Proteins for GC17M001715 Gene

Gene Ontology (GO) - Biological Process for GC17M001715 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC17M001715 Gene

Drugs & Compounds for GC17M001715 Gene

No Compound Related Data Available

Transcripts for GC17M001715 Gene

fRNAdb Secondary structures for GC17M001715 Gene

  • FR130692

Alternative Splicing Database (ASD) splice patterns (SP) for GC17M001715 Gene

No ASD Table

Relevant External Links for GC17M001715 Gene

GeneLoc Exon Structure for
GC17M001715

No data available for mRNA/cDNA for GC17M001715 Gene

Expression for GC17M001715 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC17M001715 Gene

Orthologs for GC17M001715 Gene

No data available for Orthologs and Evolution for GC17M001715 Gene

Paralogs for GC17M001715 Gene

No data available for Paralogs for GC17M001715 Gene

Variants for GC17M001715 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC17M001715 Gene

Disorders for GC17M001715 Gene

No disorders were found for GC17M001715 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC17M001715 Gene

Publications for GC17M001715 Gene

  1. Identification and classification of conserved RNA secondary structures in the human genome. (PMID: 16628248) Pedersen JS … Haussler D (PLoS computational biology 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC17M001715 Gene

Sources for GC17M001715 Gene

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