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Aliases for GC16P084460 Gene

Subcategory (RNA class) for GC16P084460 Gene

lncRNA

Quality Score for this RNA gene is

0

Aliases for GC16P084460 Gene

No Aliases found

ORGUL Members for GC16P084460 Gene

No data available for External Ids for GC16P084460 Gene

Summaries for GC16P084460 Gene

GeneCards Summary for GC16P084460 Gene

GC16P084460 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC16P084460 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC16P084460 Gene

Genomics for GC16P084460 Gene

GeneHancer (GH) Regulatory Elements for GC16P084460 Gene

Promoters and enhancers for GC16P084460 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I084367 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 0.2 -90.7 -90735 3.8 CLOCK FOXA2 NFIB NEUROD1 SIN3A RFX5 ZNF121 ZNF143 FOS RCOR1 ATP2C2 KCNG4 GC16P084460
GH16I084423 Enhancer 0.9 ENCODE 0.3 -36.5 -36548 0.1 ATF1 ARNT YY1 ETS1 ZNF766 CBX5 ZNF143 FOS CAVIN1 YY2 GC16P084460 ATP2C2
GH16I084443 Enhancer 0.6 ENCODE 0.4 -16.8 -16818 0.9 ELF3 GATAD2A SAP130 ZNF644 RAD21 RARA GABPA KLF16 ETV4 HNF4A WFDC1 ATP2C2-AS1 GC16P084460 ATP2C2
GH16I084376 Enhancer 0.7 dbSUPER 0.2 -81.8 -81772 3.8 BCOR KLF1 PKNOX1 ZMYM3 GATA3 ZNF143 ATF7 ZNF444 RCOR1 SMARCA5 ATP2C2 GC16P084460
GH16I084396 Enhancer 0.7 ENCODE 0.2 -63.5 -63538 0.2 FOXA2 SIN3A CEBPG CTBP1 GATA3 FOSL2 ZNF444 FOS TCF7L2 SMARCE1 KCNG4 ATP2C2 GC16P084460
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC16P084460 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC16P084460 Gene

Genomic Locations for GC16P084460 Gene
chr16:84,460,288-84,461,778
(GRCh38/hg38)
Size:
1,491 bases
Orientation:
Plus strand

Genomic View for GC16P084460 Gene

Genes around GC16P084460 on UCSC Golden Path with GeneCards custom track

GC16P084460 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16P084460 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC16P084460 Gene

Proteins for GC16P084460 Gene

Post-translational modifications for GC16P084460 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16P084460 Gene

Domains & Families for GC16P084460 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16P084460 Gene

Function for GC16P084460 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16P084460 Gene

Localization for GC16P084460 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC16P084460 Gene

Pathways & Interactions for GC16P084460 Gene

SuperPathways for GC16P084460 Gene

No Data Available

Interacting Proteins for GC16P084460 Gene

Gene Ontology (GO) - Biological Process for GC16P084460 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16P084460 Gene

Drugs & Compounds for GC16P084460 Gene

No Compound Related Data Available

Transcripts for GC16P084460 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC16P084460 Gene

No ASD Table

Relevant External Links for GC16P084460 Gene

GeneLoc Exon Structure for
GC16P084460

No data available for mRNA/cDNA for GC16P084460 Gene

Expression for GC16P084460 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16P084460 Gene

Orthologs for GC16P084460 Gene

No data available for Orthologs and Evolution for GC16P084460 Gene

Paralogs for GC16P084460 Gene

No data available for Paralogs for GC16P084460 Gene

Variants for GC16P084460 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC16P084460 Gene

Disorders for GC16P084460 Gene

No disorders were found for GC16P084460 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16P084460 Gene

Publications for GC16P084460 Gene

No publications were found for GC16P084460 Gene.

Products for GC16P084460 Gene

Sources for GC16P084460 Gene

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