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Aliases for GC16M019687 Gene

Subcategory (RNA class) for GC16M019687 Gene

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Quality Score for this RNA gene is

14

Aliases for GC16M019687 Gene

No Aliases found

ORGUL Members for GC16M019687 Gene

No data available for External Ids for GC16M019687 Gene

Summaries for GC16M019687 Gene

GeneCards Summary for GC16M019687 Gene

GC16M019687 is an RNA Gene, and is affiliated with the undefined RNA class.

fRNAdb sequence ontologies for GC16M019687 Gene

  • ncRNA: An RNA transcript that does not encode for a protein rather the RNA molecule is the gene product.

Additional gene information for GC16M019687 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC16M019687 Gene

Genomics for GC16M019687 Gene

GeneHancer (GH) Regulatory Elements for GC16M019687 Gene

Promoters and enhancers for GC16M019687 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J019686 Enhancer 0.7 Ensembl ENCODE dbSUPER 600.7 -1.3 -1269 5.2 ZNF335 GC16M019683 GC16M019687 GC16M019688 VPS35L KNOP1 IQCK
GH16J019685 Enhancer 0.5 dbSUPER 0.7 +2.0 2005 1.3 ZNF24 ZNF580 ZNF146 ZMYM3 ZNF280D VPS35L IQCK KNOP1 GC16M019683 GC16M019687 GC16M019688
GH16J019679 Enhancer 0.7 dbSUPER 0.4 +6.8 6768 3.2 NFIB PKNOX1 ZNF501 ZNF140 RBAK CTCF ZKSCAN1 ZNF266 ZNF580 ZNF138 RPS15A VPS35L KNOP1 SYT17 GC16M019687 GC16M019688
GH16J019683 Enhancer 0.5 dbSUPER 0.7 +3.7 3699 1.6 ZNF580 ZNF146 ZMYM3 ZNF280D VPS35L GC16M019687 GC16M019688 GC16M019683
GH16J019644 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +42.6 42572 2 PKNOX1 ZIC2 ZNF629 ZSCAN5C OSR2 TSHZ1 ATF2 ZNF366 KLF10 GLIS1 VPS35L IQCK KNOP1 GC16M019687 GC16M019688
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC16M019687 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC16M019687 Gene

Genomic Locations for GC16M019687 Gene
chr16:19,687,900-19,687,996
(GRCh38/hg38)
Size:
97 bases
Orientation:
Minus strand

Genomic View for GC16M019687 Gene

Genes around GC16M019687 on UCSC Golden Path with GeneCards custom track

GC16M019687 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16M019687 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC16M019687 Gene

Proteins for GC16M019687 Gene

Post-translational modifications for GC16M019687 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16M019687 Gene

Domains & Families for GC16M019687 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16M019687 Gene

Function for GC16M019687 Gene

Phenotypes From GWAS Catalog for GC16M019687 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16M019687 Gene

Localization for GC16M019687 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC16M019687 Gene

Pathways & Interactions for GC16M019687 Gene

PathCards logo

SuperPathways for GC16M019687 Gene

No Data Available

Interacting Proteins for GC16M019687 Gene

Gene Ontology (GO) - Biological Process for GC16M019687 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16M019687 Gene

Drugs & Compounds for GC16M019687 Gene

No Compound Related Data Available

Transcripts for GC16M019687 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC16M019687 Gene

No ASD Table

Relevant External Links for GC16M019687 Gene

GeneLoc Exon Structure for
GC16M019687

No data available for mRNA/cDNA for GC16M019687 Gene

Expression for GC16M019687 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16M019687 Gene

Orthologs for GC16M019687 Gene

No data available for Orthologs and Evolution for GC16M019687 Gene

Paralogs for GC16M019687 Gene

No data available for Paralogs for GC16M019687 Gene

Variants for GC16M019687 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC16M019687 Gene

Disorders for GC16M019687 Gene

No disorders were found for GC16M019687 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16M019687 Gene

Publications for GC16M019687 Gene

  1. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. (PMID: 18089548) Genome Information Integration Project And H-Invitational 2 … Gojobori T (Nucleic acids research 2008) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. (PMID: 15103394) Imanishi T … Sugano S (PLoS biology 2004) 1

No data available for External Links for GC16M019687 Gene

Products for GC16M019687 Gene

Sources for GC16M019687 Gene

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