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Aliases for GC16M010113 Gene

Subcategory (RNA class) for GC16M010113 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for GC16M010113 Gene

No Aliases found

No data available for External Ids for GC16M010113 Gene

Summaries for GC16M010113 Gene

GeneCards Summary for GC16M010113 Gene

GC16M010113 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC16M010113 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for GC16M010113 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC16M010113 Gene

Genomics for GC16M010113 Gene

GeneHancer (GH) Regulatory Elements for GC16M010113 Gene

Promoters and enhancers for GC16M010113 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J010113 Enhancer 0.4 dbSUPER 600.7 -1.1 -1055 2.7 CBFA2T2 CBFA2T3 GC16M010113 GC16M010114 ENSG00000261810 IMPDH1P11 GC16P010176 GRIN2A
GH16J010120 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -8.4 -8419 2.7 CTCF MAFK ZNF316 MAFG FOS ATF7 RAD21 EMSY GRIN2A ENSG00000261810 GC16M010113 GC16P010176
GH16J010141 Enhancer 0.6 Ensembl ENCODE 0.3 -28.4 -28406 0.9 IKZF1 HLF GRIN2A GC16M010113 GC16P010176
GH16J010126 Enhancer 0.4 FANTOM5 ENCODE 0.4 -13.5 -13453 1 GRIN2A ATF7IP2 GC16M010113 GC16P010176
GH16J010129 Enhancer 0.5 dbSUPER 0.4 -17.0 -16972 2.5 DPF2 ATF7 ARNT PLRG1 ATF2 GRIN2A GC16M010113 GC16P010176
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC16M010113 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC16M010113 Gene

Genomic Locations for GC16M010113 Gene
chr16:10,113,506-10,113,537
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for GC16M010113 Gene

Genes around GC16M010113 on UCSC Golden Path with GeneCards custom track

GC16M010113 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16M010113 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC16M010113 Gene

ORGUL Member Location for GC16M010113 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC16M010113 Gene

Proteins for GC16M010113 Gene

Post-translational modifications for GC16M010113 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16M010113 Gene

Domains & Families for GC16M010113 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16M010113 Gene

Function for GC16M010113 Gene

Phenotypes From GWAS Catalog for GC16M010113 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16M010113 Gene

Localization for GC16M010113 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC16M010113 Gene

Pathways & Interactions for GC16M010113 Gene

PathCards logo

SuperPathways for GC16M010113 Gene

No Data Available

Interacting Proteins for GC16M010113 Gene

Gene Ontology (GO) - Biological Process for GC16M010113 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16M010113 Gene

Drugs & Compounds for GC16M010113 Gene

No Compound Related Data Available

Transcripts for GC16M010113 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC16M010113 Gene

No ASD Table

Relevant External Links for GC16M010113 Gene

GeneLoc Exon Structure for
GC16M010113

No data available for mRNA/cDNA for GC16M010113 Gene

Expression for GC16M010113 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16M010113 Gene

Orthologs for GC16M010113 Gene

No data available for Orthologs and Evolution for GC16M010113 Gene

Paralogs for GC16M010113 Gene

No data available for Paralogs for GC16M010113 Gene

Variants for GC16M010113 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC16M010113 Gene

Disorders for GC16M010113 Gene

No disorders were found for GC16M010113 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16M010113 Gene

Publications for GC16M010113 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for GC16M010113 Gene

Products for GC16M010113 Gene

Sources for GC16M010113 Gene

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