Free for academic non-profit institutions. Other users need a Commercial license

Aliases for GC16M003806 Gene

Subcategory (RNA class) for GC16M003806 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for GC16M003806 Gene

No Aliases found

ORGUL Members for GC16M003806 Gene

No data available for External Ids for GC16M003806 Gene

Summaries for GC16M003806 Gene

GeneCards Summary for GC16M003806 Gene

GC16M003806 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for GC16M003806 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC16M003806 Gene

Genomics for GC16M003806 Gene

GeneHancer (GH) Regulatory Elements for GC16M003806 Gene

Promoters and enhancers for GC16M003806 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J003810 Enhancer 0.2 ENCODE 600.7 +1.5 1462 0.2 GC16M003806 CREBBP TRAP1 GC16M003732
GH16J003819 Promoter/Enhancer 1.3 Ensembl ENCODE 0.4 -7.7 -7728 1.2 NFIB ZSCAN21 SP7 SP1 PRDM1 POLR2A RXRA IKZF1 ZNF600 ZEB2 CREBBP TRAP1 GC16P003920 GC16M003806
GH16J003822 Promoter 1 Ensembl 0.4 -10.4 -10384 0.2 ZSCAN21 SP7 PRDM1 ZNF600 PRDM10 ZEB2 ZNF639 ZNF629 ZNF561 OSR2 CREBBP TRAP1 GC16P003920 GC16M003806
GH16J003789 Promoter/Enhancer 1.2 Ensembl ENCODE 0.3 +22.7 22716 0.4 RELA CREM MLLT1 IKZF1 IKZF2 TRIM22 PKNOX1 CBFB RUNX3 ELF1 GC16M003806 GC16M003732 CREBBP
GH16J003806 Enhancer 0.5 Ensembl 0.7 +4.5 4516 3.2 RXRA ZNF143 RAD21 HNF4A CREBBP TRAP1 GC16M003806 GC16M003732
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC16M003806 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC16M003806 Gene

Genomic Locations for GC16M003806 Gene
chr16:3,806,571-3,812,517
(GRCh38/hg38)
Size:
5,947 bases
Orientation:
Minus strand

Genomic View for GC16M003806 Gene

Genes around GC16M003806 on UCSC Golden Path with GeneCards custom track

GC16M003806 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16M003806 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC16M003806 Gene

Proteins for GC16M003806 Gene

Post-translational modifications for GC16M003806 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16M003806 Gene

Domains & Families for GC16M003806 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16M003806 Gene

Function for GC16M003806 Gene

Phenotypes From GWAS Catalog for GC16M003806 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16M003806 Gene

Localization for GC16M003806 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC16M003806 Gene

Pathways & Interactions for GC16M003806 Gene

PathCards logo

SuperPathways for GC16M003806 Gene

No Data Available

Interacting Proteins for GC16M003806 Gene

Gene Ontology (GO) - Biological Process for GC16M003806 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16M003806 Gene

Drugs & Compounds for GC16M003806 Gene

No Compound Related Data Available

Transcripts for GC16M003806 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC16M003806 Gene

No ASD Table

Relevant External Links for GC16M003806 Gene

GeneLoc Exon Structure for
GC16M003806

No data available for mRNA/cDNA for GC16M003806 Gene

Expression for GC16M003806 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16M003806 Gene

Orthologs for GC16M003806 Gene

No data available for Orthologs and Evolution for GC16M003806 Gene

Paralogs for GC16M003806 Gene

No data available for Paralogs for GC16M003806 Gene

Variants for GC16M003806 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC16M003806 Gene

Disorders for GC16M003806 Gene

No disorders were found for GC16M003806 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16M003806 Gene

Publications for GC16M003806 Gene

No publications were found for GC16M003806 Gene.

No data available for External Links for GC16M003806 Gene

Products for GC16M003806 Gene

Sources for GC16M003806 Gene

Content
Loading form....