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Aliases for GC16M003552 Gene

Subcategory (RNA class) for GC16M003552 Gene

antisense

Quality Score for this RNA gene is

13

Aliases for GC16M003552 Gene

No Aliases found

ORGUL Members for GC16M003552 Gene

No data available for External Ids for GC16M003552 Gene

Summaries for GC16M003552 Gene

GeneCards Summary for GC16M003552 Gene

GC16M003552 is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for GC16M003552 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC16M003552 Gene

Genomics for GC16M003552 Gene

GeneHancer (GH) Regulatory Elements for GC16M003552 Gene

Promoters and enhancers for GC16M003552 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J003555 Enhancer 0.7 Ensembl 600.7 -0.5 -508 0.6 ZNF404 ZNF680 ZNF560 ZNF639 ZNF140 ZNF580 ZNF213 ZNF202 ZNF654 ZNF664 GC16M003552 ENSG00000261938 ZNF263 ZNF75A ERVK13-1 SRRM2 ENSG00000262482 ZNF213-AS1 CREBBP ZNF597
GH16J003556 Promoter 0.5 EPDnew 600.7 -2.0 -1987 0.1 GC16M003552 NLRC3 SLX4 LOC105371060 LOC101929732
GH16J003552 Enhancer 0.5 ENCODE 600.7 +1.7 1710 0.8 SP1 NANOG POLR2A SMARCE1 POU5F1 GC16M003552 NLRC3 CLUAP1 TRAP1 MEFV DNASE1 ENSG00000262312 LOC101929732
GH16J003554 Enhancer 0.4 ENCODE 600.7 +0.4 378 0.8 USF1 NANOG GC16M003552 NLRC3 CLUAP1 TRAP1 MEFV ENSG00000262312 LOC101929732
GH16J003557 Enhancer 0.2 Ensembl 600.7 -1.5 -1508 0.2 GC16M003552 SLX4 DNASE1 LOC105371060 LOC101929732 NLRC3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around GC16M003552 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC16M003552 Gene

Genomic Locations for GC16M003552 Gene
chr16:3,552,899-3,554,993
(GRCh38/hg38)
Size:
2,095 bases
Orientation:
Minus strand

Genomic View for GC16M003552 Gene

Genes around GC16M003552 on UCSC Golden Path with GeneCards custom track

GC16M003552 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC16M003552 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC16M003552 Gene

Proteins for GC16M003552 Gene

Post-translational modifications for GC16M003552 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC16M003552 Gene

Domains & Families for GC16M003552 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC16M003552 Gene

Function for GC16M003552 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC16M003552 Gene

Localization for GC16M003552 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC16M003552 Gene

Pathways & Interactions for GC16M003552 Gene

PathCards logo

SuperPathways for GC16M003552 Gene

No Data Available

Interacting Proteins for GC16M003552 Gene

Gene Ontology (GO) - Biological Process for GC16M003552 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC16M003552 Gene

Drugs & Compounds for GC16M003552 Gene

No Compound Related Data Available

Transcripts for GC16M003552 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC16M003552 Gene

No ASD Table

Relevant External Links for GC16M003552 Gene

GeneLoc Exon Structure for
GC16M003552

No data available for mRNA/cDNA for GC16M003552 Gene

Expression for GC16M003552 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC16M003552 Gene

Orthologs for GC16M003552 Gene

No data available for Orthologs and Evolution for GC16M003552 Gene

Paralogs for GC16M003552 Gene

No data available for Paralogs for GC16M003552 Gene

Variants for GC16M003552 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC16M003552 Gene

Disorders for GC16M003552 Gene

No disorders were found for GC16M003552 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC16M003552 Gene

Publications for GC16M003552 Gene

No publications were found for GC16M003552 Gene.

No data available for External Links for GC16M003552 Gene

Products for GC16M003552 Gene

Sources for GC16M003552 Gene

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