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Aliases for GC15M046272 Gene

Subcategory (RNA class) for GC15M046272 Gene


Quality Score for this RNA gene is


Aliases for GC15M046272 Gene

No Aliases found

ORGUL Members for GC15M046272 Gene

No data available for External Ids for GC15M046272 Gene

Summaries for GC15M046272 Gene

GeneCards Summary for GC15M046272 Gene

GC15M046272 is an RNA Gene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for GC15M046272 Gene

  • mature_transcript: A transcript which has undergone the necessary modifications, if any, for its function. In eukaryotes this includes, for example, processing of introns, cleavage, base modification, and modifications to the 5' and/or the 3' ends, other than addition of bases. In bacteria functional mRNAs are usually not modified.

Additional gene information for GC15M046272 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC15M046272 Gene

Genomics for GC15M046272 Gene

GeneHancer (GH) Regulatory Elements for GC15M046272 Gene

Promoters and enhancers for GC15M046272 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J046312 Enhancer 0.7 ENCODE dbSUPER 0.2 +56.0 56008 0.1 CTCF ZNF654 TRIM22 ZNF143 SMC3 REST RAD21 GC15M046298 GC15M046294 GC15M046272
GH15J046303 Enhancer 0.5 dbSUPER 0.2 +63.6 63616 3.2 CTCF ZNF143 SMC3 RAD21 GC15M046298 GC15M046294 GC15M046272
GH15J046297 Enhancer 0.5 dbSUPER 0.2 +67.9 67853 5 POLR2A BCL11A DPF2 BATF IRF4 SPI1 GC15M046298 GC15M046273 GC15M046294 GC15M046272
GH15J046341 Enhancer 0.2 dbSUPER 0.3 +24.0 24035 5.9 SPATA5L1 MTND5P40 ENSG00000238819 GC15M046272 GC15M046328
GH15J046325 Enhancer 0.2 dbSUPER 0.3 +41.9 41905 1 ENSG00000238819 GC15M046294 GC15M046298 GC15M046272
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC15M046272 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC15M046272 Gene

Genomic Locations for GC15M046272 Gene
95,975 bases
Minus strand

Genomic View for GC15M046272 Gene

Genes around GC15M046272 on UCSC Golden Path with GeneCards custom track

GC15M046272 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC15M046272 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC15M046272 Gene

ORGUL Member Location for GC15M046272 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC15M046272 Gene

Proteins for GC15M046272 Gene

Post-translational modifications for GC15M046272 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC15M046272 Gene

Domains & Families for GC15M046272 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC15M046272 Gene

Function for GC15M046272 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC15M046272 Gene

Localization for GC15M046272 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC15M046272 Gene

Pathways & Interactions for GC15M046272 Gene

SuperPathways for GC15M046272 Gene

No Data Available

Interacting Proteins for GC15M046272 Gene

Gene Ontology (GO) - Biological Process for GC15M046272 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC15M046272 Gene

Drugs & Compounds for GC15M046272 Gene

No Compound Related Data Available

Transcripts for GC15M046272 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC15M046272 Gene

No ASD Table

Relevant External Links for GC15M046272 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC15M046272 Gene

Expression for GC15M046272 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC15M046272 Gene

Orthologs for GC15M046272 Gene

No data available for Orthologs and Evolution for GC15M046272 Gene

Paralogs for GC15M046272 Gene

No data available for Paralogs for GC15M046272 Gene

Variants for GC15M046272 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC15M046272 Gene

Disorders for GC15M046272 Gene

No disorders were found for GC15M046272 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC15M046272 Gene

Publications for GC15M046272 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. The ancestral gene for transcribed, low-copy repeats in the Prader-Willi/Angelman region encodes a large protein implicated in protein trafficking, which is deficient in mice with neuromuscular and spermiogenic abnormalities. (PMID: 9949213) Ji Y … Nicholls RD (Human molecular genetics 1999) 1

Products for GC15M046272 Gene

Sources for GC15M046272 Gene

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