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Aliases for GC15M045048 Gene

Subcategory (RNA class) for GC15M045048 Gene

Y RNA

Quality Score for this RNA gene is

15

Aliases for GC15M045048 Gene

No Aliases found

ORGUL Members for GC15M045048 Gene

No data available for External Ids for GC15M045048 Gene

Summaries for GC15M045048 Gene

GeneCards Summary for GC15M045048 Gene

GC15M045048 is an RNA Gene, and is affiliated with the Y RNA class.

Additional gene information for GC15M045048 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for GC15M045048 Gene

Genomics for GC15M045048 Gene

GeneHancer (GH) Regulatory Elements for GC15M045048 Gene

Promoters and enhancers for GC15M045048 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J045047 Enhancer 1.5 FANTOM5 Ensembl ENCODE 650.7 -1.7 -1714 2.6 PKNOX1 SMAD1 ATF1 ARNT ZNF280A TCF12 ZNF766 GATA2 ATF7 NCOA1 ENSG00000252171 GC15M045048 SORD SPG11 SPATA5L1 CTDSPL2 ENSG00000259563 B2M LOC100422669 ENSG00000259418
GH15J045036 Enhancer 1.1 Ensembl ENCODE 0.4 +10.0 10015 0.8 FOXA2 MLX ARID4B ZNF2 SLC30A9 ARID2 ZNF207 ZNF143 ATF7 RXRA SORD RNU6-966P DUOX2 SORD2P GC15M045029 PIR54221 GC15M045048 ENSG00000252171
GH15J045035 Enhancer 0.3 Ensembl 0.4 +11.3 11314 0.6 KLF9 RNU6-966P GC15M045029 PIR54221 GC15M045048 ENSG00000252171 SORD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC15M045048 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC15M045048 Gene

Genomic Locations for GC15M045048 Gene
chr15:45,047,104-45,047,215
(GRCh38/hg38)
Size:
112 bases
Orientation:
Minus strand

Genomic View for GC15M045048 Gene

Genes around GC15M045048 on UCSC Golden Path with GeneCards custom track

GC15M045048 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC15M045048 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC15M045048 Gene

Proteins for GC15M045048 Gene

Post-translational modifications for GC15M045048 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC15M045048 Gene

Domains & Families for GC15M045048 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC15M045048 Gene

Function for GC15M045048 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC15M045048 Gene

Localization for GC15M045048 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC15M045048 Gene

Pathways & Interactions for GC15M045048 Gene

SuperPathways for GC15M045048 Gene

No Data Available

Interacting Proteins for GC15M045048 Gene

Gene Ontology (GO) - Biological Process for GC15M045048 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC15M045048 Gene

Drugs & Compounds for GC15M045048 Gene

No Compound Related Data Available

Transcripts for GC15M045048 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC15M045048 Gene

No ASD Table

Relevant External Links for GC15M045048 Gene

GeneLoc Exon Structure for
GC15M045048

No data available for mRNA/cDNA for GC15M045048 Gene

Expression for GC15M045048 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC15M045048 Gene

Orthologs for GC15M045048 Gene

No data available for Orthologs and Evolution for GC15M045048 Gene

Paralogs for GC15M045048 Gene

No data available for Paralogs for GC15M045048 Gene

Variants for GC15M045048 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC15M045048 Gene

Disorders for GC15M045048 Gene

No disorders were found for GC15M045048 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC15M045048 Gene

Publications for GC15M045048 Gene

  1. Conserved features of Y RNAs: a comparison of experimentally derived secondary structures. (PMID: 10606662) Teunissen SW … Pruijn GJ (Nucleic acids research 2000) 1
  2. Ro ribonucleoproteins contribute to the resistance of Deinococcus radiodurans to ultraviolet irradiation. (PMID: 10766734) Chen X … Wolin SL (Genes & development 2000) 1
  3. Caenorhabditis elegans embryos contain only one major species of Ro RNP. (PMID: 7489501) Van Horn DJ … Wolin SL (RNA (New York, N.Y.) 1995) 1

Products for GC15M045048 Gene

Sources for GC15M045048 Gene

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