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Aliases for GC15M045003 Gene

Subcategory (RNA class) for GC15M045003 Gene


Quality Score for this RNA gene is


Aliases for GC15M045003 Gene

No Aliases found

ORGUL Members for GC15M045003 Gene

No data available for External Ids for GC15M045003 Gene

Summaries for GC15M045003 Gene

GeneCards Summary for GC15M045003 Gene

GC15M045003 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC15M045003 Gene

  • U1_snRNA: U1 is a small nuclear RNA (snRNA) component of the spliceosome (involved in pre-mRNA splicing). Its 5' end forms complementary base pairs with the 5' splice junction, thus defining the 5' donor site of an intron. There are significant differences in sequence and secondary structure between metazoan and yeast U1 snRNAs, the latter being much longer (568 nucleotides as compared to 164 nucleotides in human). Nevertheless, secondary structure predictions suggest that all U1 snRNAs share a 'common core' consisting of helices I, II, the proximal region of III, and IV.

Additional gene information for GC15M045003 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC15M045003 Gene

Genomics for GC15M045003 Gene

GeneHancer (GH) Regulatory Elements for GC15M045003 Gene

Promoters and enhancers for GC15M045003 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J045021 Enhancer 0.4 ENCODE 0.4 -18.5 -18470 0.1 JUND JUN RCOR1 SORD GC15M045003 RNU1-78P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC15M045003 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC15M045003 Gene

Genomic Locations for GC15M045003 Gene
166 bases
Minus strand

Genomic View for GC15M045003 Gene

Genes around GC15M045003 on UCSC Golden Path with GeneCards custom track

GC15M045003 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC15M045003 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC15M045003 Gene

Proteins for GC15M045003 Gene

Post-translational modifications for GC15M045003 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC15M045003 Gene

Domains & Families for GC15M045003 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC15M045003 Gene

Function for GC15M045003 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC15M045003 Gene

Localization for GC15M045003 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC15M045003 Gene

Pathways & Interactions for GC15M045003 Gene

SuperPathways for GC15M045003 Gene

No Data Available

Interacting Proteins for GC15M045003 Gene

Gene Ontology (GO) - Biological Process for GC15M045003 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC15M045003 Gene

Drugs & Compounds for GC15M045003 Gene

No Compound Related Data Available

Transcripts for GC15M045003 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC15M045003 Gene

No ASD Table

Relevant External Links for GC15M045003 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC15M045003 Gene

Expression for GC15M045003 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC15M045003 Gene

Orthologs for GC15M045003 Gene

No data available for Orthologs and Evolution for GC15M045003 Gene

Paralogs for GC15M045003 Gene

No data available for Paralogs for GC15M045003 Gene

Variants for GC15M045003 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC15M045003 Gene

Disorders for GC15M045003 Gene

No disorders were found for GC15M045003 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC15M045003 Gene

Publications for GC15M045003 Gene

  1. Two functionally distinct steps mediate high affinity binding of U1A protein to U1 hairpin II RNA. (PMID: 11297556) Katsamba PS … Laird-Offringa IA (The Journal of biological chemistry 2001) 1
  2. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  3. Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin. (PMID: 7984237) Oubridge C … Nagai K (Nature 1994) 1
  4. Saccharomyces cerevisiae U1 small nuclear RNA secondary structure contains both universal and yeast-specific domains. (PMID: 2405391) Kretzner L … Rosbash M (Proceedings of the National Academy of Sciences of the United States of America 1990) 1

Products for GC15M045003 Gene

Sources for GC15M045003 Gene

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