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Aliases for GC15M042579 Gene

Subcategory (RNA class) for GC15M042579 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for GC15M042579 Gene

No Aliases found

ORGUL Members for GC15M042579 Gene

No data available for External Ids for GC15M042579 Gene

Summaries for GC15M042579 Gene

GeneCards Summary for GC15M042579 Gene

GC15M042579 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for GC15M042579 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for GC15M042579

Additional gene information for GC15M042579 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC15M042579 Gene

Genomics for GC15M042579 Gene

GeneHancer (GH) Regulatory Elements for GC15M042579 Gene

Promoters and enhancers for GC15M042579 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J042581 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 650.7 -2.0 -1987 1.3 RB1 ARID4B DMAP1 ZNF48 ZSCAN9 RAD21 YY1 ZNF335 EGR1 RCOR1 EIF4EBP2P2 GC15M042581 GC15M042579 LRRC57 HAUS2 CAPN3 STARD9 PIR61026
GH15J042577 Enhancer 1 Ensembl ENCODE dbSUPER 650.7 +1.8 1815 1.1 CBFA2T3 FEZF1 ZIC2 CTBP1 GLIS1 ZBTB33 PRDM10 PRDM1 ZXDB SPI1 GC15M042579 LRRC57 HAUS2 CAPN3 STARD9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC15M042579 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC15M042579 Gene

Genomic Locations for GC15M042579 Gene
chr15:42,579,720-42,579,752
(GRCh38/hg38)
Size:
33 bases
Orientation:
Minus strand

Genomic View for GC15M042579 Gene

Genes around GC15M042579 on UCSC Golden Path with GeneCards custom track

GC15M042579 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC15M042579 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for GC15M042579 Gene

ORGUL Member Location for GC15M042579 gene

No data available for Cytogenetic band and RefSeq DNA sequence for GC15M042579 Gene

Proteins for GC15M042579 Gene

Post-translational modifications for GC15M042579 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC15M042579 Gene

Domains & Families for GC15M042579 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC15M042579 Gene

Function for GC15M042579 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC15M042579 Gene

Localization for GC15M042579 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC15M042579 Gene

Pathways & Interactions for GC15M042579 Gene

SuperPathways for GC15M042579 Gene

No Data Available

Interacting Proteins for GC15M042579 Gene

Gene Ontology (GO) - Biological Process for GC15M042579 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC15M042579 Gene

Drugs & Compounds for GC15M042579 Gene

No Compound Related Data Available

Transcripts for GC15M042579 Gene

fRNAdb Secondary structures for GC15M042579 Gene

  • FR121042

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC15M042579 Gene

No ASD Table

Relevant External Links for GC15M042579 Gene

GeneLoc Exon Structure for
GC15M042579

No data available for mRNA/cDNA for GC15M042579 Gene

Expression for GC15M042579 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC15M042579 Gene

Orthologs for GC15M042579 Gene

No data available for Orthologs and Evolution for GC15M042579 Gene

Paralogs for GC15M042579 Gene

No data available for Paralogs for GC15M042579 Gene

Variants for GC15M042579 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC15M042579 Gene

Disorders for GC15M042579 Gene

No disorders were found for GC15M042579 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC15M042579 Gene

Publications for GC15M042579 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for GC15M042579 Gene

Sources for GC15M042579 Gene

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