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Aliases for GC15M041450 Gene

Subcategory (RNA class) for GC15M041450 Gene


Quality Score for this RNA gene is


Aliases for GC15M041450 Gene

No Aliases found

ORGUL Members for GC15M041450 Gene

No data available for External Ids for GC15M041450 Gene

Summaries for GC15M041450 Gene

GeneCards Summary for GC15M041450 Gene

GC15M041450 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC15M041450 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC15M041450 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC15M041450 Gene

Genomics for GC15M041450 Gene

GeneHancer (GH) Regulatory Elements for GC15M041450 Gene

Promoters and enhancers for GC15M041450 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J041416 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 +31.6 31575 2.5 CLOCK ATF1 MLX ARID4B SIN3A DMAP1 YY1 ETS1 GTF3C2 POLR2B RTF1 NDUFAF1 INO80 DNAJC17 LOC105370795 ENSG00000259211 GANC BAHD1 MGA RPAP1
GH15J041409 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.3 +38.9 38941 1 HDAC1 ATF1 ARNT ZBTB40 TCF12 ATF7 CREM SMARCA5 CEBPB NCOA1 RTF1 NDUFAF1 ZFYVE19 INO80 GC15M041450 GC15M041410
GH15J041437 Enhancer 0.6 ENCODE 0.4 +10.6 10579 1.5 CTCF SMARCA5 MEIS2 PKNOX1 ZNF362 ATF1 L3MBTL2 CBFA2T3 ZNF384 FOSL1 NDUFAF1 GC15M041450 RTF1 GC15M041410
GH15J041407 Enhancer 0.7 Ensembl ENCODE 0.3 +40.4 40386 1.3 MITF ZNF335 POLR2A BHLHE40 RTF1 NDUFAF1 ZFYVE19 GC15M041450
GH15J041428 Enhancer 0.4 ENCODE 0.4 +19.6 19557 1.4 IKZF1 MLLT1 RUNX3 NDUFAF1 LTK RPAP1 TYRO3 GC15M041450 RTF1 GC15M041410
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC15M041450 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC15M041450 Gene

Genomic Locations for GC15M041450 Gene
102 bases
Minus strand

Genomic View for GC15M041450 Gene

Genes around GC15M041450 on UCSC Golden Path with GeneCards custom track

GC15M041450 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC15M041450 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC15M041450 Gene

Proteins for GC15M041450 Gene

Post-translational modifications for GC15M041450 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC15M041450 Gene

Domains & Families for GC15M041450 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC15M041450 Gene

Function for GC15M041450 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC15M041450 Gene

Localization for GC15M041450 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC15M041450 Gene

Pathways & Interactions for GC15M041450 Gene

SuperPathways for GC15M041450 Gene

No Data Available

Interacting Proteins for GC15M041450 Gene

Gene Ontology (GO) - Biological Process for GC15M041450 Gene


No data available for Pathways by source and SIGNOR curated interactions for GC15M041450 Gene

Drugs & Compounds for GC15M041450 Gene

No Compound Related Data Available

Transcripts for GC15M041450 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC15M041450 Gene

No ASD Table

Relevant External Links for GC15M041450 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for GC15M041450 Gene

Expression for GC15M041450 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC15M041450 Gene

Orthologs for GC15M041450 Gene

No data available for Orthologs and Evolution for GC15M041450 Gene

Paralogs for GC15M041450 Gene

No data available for Paralogs for GC15M041450 Gene

Variants for GC15M041450 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC15M041450 Gene

Disorders for GC15M041450 Gene

No disorders were found for GC15M041450 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC15M041450 Gene

Publications for GC15M041450 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC15M041450 Gene

Sources for GC15M041450 Gene

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