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Aliases for GC15M031068 Gene

Subcategory (RNA class) for GC15M031068 Gene

miRNA

Quality Score for this RNA gene is

13

Aliases for GC15M031068 Gene

No Aliases found

ORGUL Members for GC15M031068 Gene

No data available for External Ids for GC15M031068 Gene

Summaries for GC15M031068 Gene

GeneCards Summary for GC15M031068 Gene

GC15M031068 is an RNA Gene, and is affiliated with the miRNA class.

fRNAdb sequence ontologies for GC15M031068 Gene

  • pre_miRNA: The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin sructure.

Additional gene information for GC15M031068 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC15M031068 Gene

Genomics for GC15M031068 Gene

GeneHancer (GH) Regulatory Elements for GC15M031068 Gene

Promoters and enhancers for GC15M031068 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J031079 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.4 -12.5 -12534 4.8 SOX5 NFIA RXRA L3MBTL2 SP5 REST ZIC2 NFIC POLR2A GLIS1 MTMR10 CHRNA7 GC15M031068 TRPM1
GH15J031078 Promoter 0.6 EPDnew 0.4 -9.6 -9622 0.1 POLR2A TRPM1 GC15M031068
GH15J031092 Enhancer 0.8 ENCODE 0.3 -23.7 -23700 0.1 ELF3 SOX13 TFAP4 FOXA2 ZBTB40 RARA RERE IKZF5 FOSL2 NR2F6 MTMR10 TRPM1 FAN1 GC15M031068
GH15J031089 Enhancer 0.8 ENCODE 0.3 -20.4 -20430 0.2 FOXA2 ZFP64 ZNF48 RARA RXRA CEBPB NR2F2 SP1 NFIL3 MIER3 MTMR10 TRPM1 FAN1 GC15M031068
GH15J031101 Promoter 0.7 EPDnew 0.3 -32.6 -32618 0.1 ZEB2 EZH2 ZEB1 TRPM1 MTMR10 GC15M031068
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC15M031068 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC15M031068 Gene

Genomic Locations for GC15M031068 Gene
chr15:31,068,993-31,069,123
(GRCh38/hg38)
Size:
131 bases
Orientation:
Minus strand

Genomic View for GC15M031068 Gene

Genes around GC15M031068 on UCSC Golden Path with GeneCards custom track

GC15M031068 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC15M031068 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC15M031068 Gene

Proteins for GC15M031068 Gene

Post-translational modifications for GC15M031068 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC15M031068 Gene

Domains & Families for GC15M031068 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC15M031068 Gene

Function for GC15M031068 Gene

Phenotypes From GWAS Catalog for GC15M031068 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC15M031068 Gene

Localization for GC15M031068 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC15M031068 Gene

Pathways & Interactions for GC15M031068 Gene

SuperPathways for GC15M031068 Gene

No Data Available

Interacting Proteins for GC15M031068 Gene

Gene Ontology (GO) - Biological Process for GC15M031068 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC15M031068 Gene

Drugs & Compounds for GC15M031068 Gene

No Compound Related Data Available

Transcripts for GC15M031068 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC15M031068 Gene

No ASD Table

Relevant External Links for GC15M031068 Gene

GeneLoc Exon Structure for
GC15M031068

No data available for mRNA/cDNA for GC15M031068 Gene

Expression for GC15M031068 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC15M031068 Gene

Orthologs for GC15M031068 Gene

No data available for Orthologs and Evolution for GC15M031068 Gene

Paralogs for GC15M031068 Gene

No data available for Paralogs for GC15M031068 Gene

Variants for GC15M031068 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC15M031068 Gene

Disorders for GC15M031068 Gene

No disorders were found for GC15M031068 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC15M031068 Gene

Publications for GC15M031068 Gene

  1. Identification of clustered microRNAs using an ab initio prediction method. (PMID: 16274478) Sewer A … Zavolan M (BMC bioinformatics 2005) 1

Products for GC15M031068 Gene

Sources for GC15M031068 Gene

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