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Aliases for GC14P103339 Gene

Subcategory (RNA class) for GC14P103339 Gene

SECIS

Quality Score for this RNA gene is

15

Aliases for GC14P103339 Gene

No Aliases found

ORGUL Members for GC14P103339 Gene

No data available for External Ids for GC14P103339 Gene

Summaries for GC14P103339 Gene

GeneCards Summary for GC14P103339 Gene

GC14P103339 is an RNA Gene, and is affiliated with the SECIS RNA class.

fRNAdb sequence ontologies for GC14P103339 Gene

  • SECIS_element: The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.

Additional gene information for GC14P103339 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC14P103339 Gene

Genomics for GC14P103339 Gene

GeneHancer (GH) Regulatory Elements for GC14P103339 Gene

Promoters and enhancers for GC14P103339 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J101561 Enhancer 0.6 ENCODE 650.7 -1.6 -1609 0.2 SP3 L3MBTL2 SP2 ZBTB8A GLIS2 ZFHX2 ZBTB48 POLR2A SETDB1 DIO3OS GC14P103339 MIR1247 DIO3 GC14P103476
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC14P103339 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC14P103339 Gene

Genomic Locations for GC14P103339 Gene
chr14:101,562,998-101,563,060
(GRCh38/hg38)
Size:
63 bases
Orientation:
Plus strand

Genomic View for GC14P103339 Gene

Genes around GC14P103339 on UCSC Golden Path with GeneCards custom track

GC14P103339 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC14P103339 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC14P103339 Gene

Proteins for GC14P103339 Gene

Post-translational modifications for GC14P103339 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC14P103339 Gene

Domains & Families for GC14P103339 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC14P103339 Gene

Function for GC14P103339 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for GC14P103339 Gene

Localization for GC14P103339 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC14P103339 Gene

Pathways & Interactions for GC14P103339 Gene

SuperPathways for GC14P103339 Gene

No Data Available

Interacting Proteins for GC14P103339 Gene

Gene Ontology (GO) - Biological Process for GC14P103339 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC14P103339 Gene

Drugs & Compounds for GC14P103339 Gene

No Compound Related Data Available

Transcripts for GC14P103339 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for GC14P103339 Gene

No ASD Table

Relevant External Links for GC14P103339 Gene

GeneLoc Exon Structure for
GC14P103339

No data available for mRNA/cDNA for GC14P103339 Gene

Expression for GC14P103339 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC14P103339 Gene

Orthologs for GC14P103339 Gene

No data available for Orthologs and Evolution for GC14P103339 Gene

Paralogs for GC14P103339 Gene

No data available for Paralogs for GC14P103339 Gene

Variants for GC14P103339 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC14P103339 Gene

Disorders for GC14P103339 Gene

No disorders were found for GC14P103339 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC14P103339 Gene

Publications for GC14P103339 Gene

  1. A survey of metazoan selenocysteine insertion sequences. (PMID: 12458087) Lambert A … Gautheret D (Biochimie 2002) 1
  2. A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs. (PMID: 8634917) Walczak R … Krol A (RNA (New York, N.Y.) 1996) 1

Products for GC14P103339 Gene

Sources for GC14P103339 Gene

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