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Aliases for GC14P103247 Gene

Subcategory (RNA class) for GC14P103247 Gene

snRNA

Quality Score for this RNA gene is

12

Aliases for GC14P103247 Gene

No Aliases found

ORGUL Members for GC14P103247 Gene

No data available for External Ids for GC14P103247 Gene

Summaries for GC14P103247 Gene

GeneCards Summary for GC14P103247 Gene

GC14P103247 is an RNA Gene, and is affiliated with the snRNA class.

fRNAdb sequence ontologies for GC14P103247 Gene

  • U6_snRNA: U6 snRNA is a component of the spliceosome which is involved in splicing pre-mRNA. The putative secondary structure consensus base pairing is confined to a short 5' stem loop, but U6 snRNA is thought to form extensive base-pair interactions with U4 snRNA.

Additional gene information for GC14P103247 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for GC14P103247 Gene

Genomics for GC14P103247 Gene

GeneHancer (GH) Regulatory Elements for GC14P103247 Gene

Promoters and enhancers for GC14P103247 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I102863 Enhancer 0.5 ENCODE 0.8 -2.3 -2296 0.2 CTBP1 ESRRA GATA3 SIN3A DPF2 FOXA1 GC14P103247 TRAF3
GH14I102848 Enhancer 0.9 Ensembl ENCODE 0.4 -16.2 -16184 2.9 TAL1 MAX RAD21 YY1 ZNF121 TCF12 ZNF335 POLR2A HNF4G RCOR1 TRAF3 GC14P103247
GH14I102827 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -37.7 -37685 1.1 TEAD4 TAL1 TCF12 POLR2A NCOR1 CBFA2T2 NFE2 CREM CBFA2T3 DPF2 TRAF3 RNU6-1316P GC14P103247
GH14I102804 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -59.1 -59120 4.5 HDGF PKNOX1 BATF ZNF121 GLIS2 ZNF143 ATF7 FOS IKZF2 RUNX3 TRAF3 RNU6-1316P GC14P103247
GH14I102818 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.2 -46.4 -46409 2.1 HDGF PKNOX1 SMAD1 BMI1 BATF KLF5 YY1 ZNF335 GLIS2 ZNF366 TRAF3 RNU6-1316P GC14P103247
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around GC14P103247 on UCSC Golden Path with GeneCards custom track

Genomic Locations for GC14P103247 Gene

Genomic Locations for GC14P103247 Gene
chr14:102,865,855-102,865,962
(GRCh38/hg38)
Size:
108 bases
Orientation:
Plus strand

Genomic View for GC14P103247 Gene

Genes around GC14P103247 on UCSC Golden Path with GeneCards custom track

GC14P103247 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for GC14P103247 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for GC14P103247 Gene

Proteins for GC14P103247 Gene

Post-translational modifications for GC14P103247 Gene

No Post-translational modifications

No data available for DME Specific Peptides for GC14P103247 Gene

Domains & Families for GC14P103247 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for GC14P103247 Gene

Function for GC14P103247 Gene

Animal Model Products

miRNA for GC14P103247 Gene

miRTarBase miRNAs that target GC14P103247

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for GC14P103247 Gene

Localization for GC14P103247 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for GC14P103247 Gene

Pathways & Interactions for GC14P103247 Gene

SuperPathways for GC14P103247 Gene

No Data Available

Interacting Proteins for GC14P103247 Gene

Gene Ontology (GO) - Biological Process for GC14P103247 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for GC14P103247 Gene

Drugs & Compounds for GC14P103247 Gene

No Compound Related Data Available

Transcripts for GC14P103247 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for GC14P103247 Gene

No ASD Table

Relevant External Links for GC14P103247 Gene

GeneLoc Exon Structure for
GC14P103247

No data available for mRNA/cDNA for GC14P103247 Gene

Expression for GC14P103247 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for GC14P103247 Gene

Orthologs for GC14P103247 Gene

No data available for Orthologs and Evolution for GC14P103247 Gene

Paralogs for GC14P103247 Gene

No data available for Paralogs for GC14P103247 Gene

Variants for GC14P103247 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for GC14P103247 Gene

Disorders for GC14P103247 Gene

No disorders were found for GC14P103247 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for GC14P103247 Gene

Publications for GC14P103247 Gene

  1. The uRNA database. (PMID: 9016512) Zwieb C (Nucleic acids research 1997) 1
  2. Spliceosomal small nuclear RNAs of Tetrahymena thermophila and some possible snRNA-snRNA base-pairing interactions. (PMID: 1960724) Orum H … Engberg J (Journal of molecular biology 1991) 1
  3. The spliceosomal snRNAs of Caenorhabditis elegans. (PMID: 2339054) Thomas J … Blumenthal T (Nucleic acids research 1990) 1

Products for GC14P103247 Gene

Sources for GC14P103247 Gene

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